Pirellula sp. SH-Sr6A: VN12_22320
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Entry
VN12_22320 CDS
T04360
Symbol
rutR
Name
(GenBank) HTH-type transcriptional regulator RutR
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pir03000
]
VN12_22320 (rutR)
Transcription factors [BR:
pir03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VN12_22320 (rutR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
HTH_22
HTH_11
LacI
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
AMV34879
UniProt:
A0A142Y6P7
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All DBs
Position
5470014..5470631
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AA seq
205 aa
AA seq
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MQTGERLTDRKRVDILSAAVSCFSEMGFDNTSMDLIAQQAGVSKRTVYNHFPSKDRLFEA
IVSQLKDHAARAVPLCYRSDETLERQLEPFCLGVIEFHCHPDSRVLGRILISRFIRNPQL
GHEMFGNTKIFENLLVQWIQSAQKDKRILEGDANFASKQLLMLVEGFCVWPQLILNATNP
SKPQKKKIANAAVKMFLQTYRAPSR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccggtgaacggctaaccgaccgtaagcgagtcgatatcctctccgccgccgta
tcctgtttctctgaaatgggtttcgacaacaccagtatggatttgatcgcgcagcaggcc
ggagtttcgaagcgaacggtttacaaccattttcccagtaaagatcgcctcttcgaggcg
attgtgtcgcaactcaaagaccatgccgctcgcgcggtccctctttgctaccggtcggac
gaaacgctggaacggcaactggagcccttttgcctcggcgtgatcgaattccactgtcat
ccggattcgcgggttctcggaagaatcctcatttcccggtttatccgtaatccacagctc
gggcatgaaatgtttggcaatacaaaaatcttcgaaaatctcctcgtccaatggatccaa
tcggcccaaaaggacaagcgtattttggaaggcgatgcgaactttgcttccaaacaacta
ctgatgctcgtagaaggattctgtgtttggccccagctcatcctcaatgcaacaaacccg
tccaagccgcaaaagaagaaaatcgcgaacgccgctgtcaagatgtttcttcagacctac
cgcgcaccatcccgatag
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