Pirellula sp. SH-Sr6A: VN12_22440
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Entry
VN12_22440 CDS
T04360
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pir03016
]
VN12_22440 (truA)
Enzymes [BR:
pir01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VN12_22440 (truA)
Transfer RNA biogenesis [BR:
pir03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VN12_22440 (truA)
Prokaryotic type
VN12_22440 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Thymidylat_synt
Motif
Other DBs
NCBI-ProteinID:
AMV34903
UniProt:
A0A142Y6S5
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All DBs
Position
5502445..5503263
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AA seq
272 aa
AA seq
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MRWFALTVAYDGTTYGGWQVQSNAPSIQQHLIIAIEKATGEKVHVQGSGRTDSGVHATGQ
VASIRLQNWRAPPERLVPAINRFLPRSIVVRSVQHVVDGFDAIRNAKSKRYCYSIWNARV
SDPLHARVHWWVPRPLDVEAMQRAADLLLGTHDFKAFETLGSPRKSSIRTIYDLPVRSVP
YLDGQNISIEMEADGFLYNMVRNIVGALCEVGVGRFSPRWIQSVLESKMRDSSSQTAPGQ
GLCLVSVRYPESCFIPLGTQDSQDISSSNQNS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcgatggtttgcccttacagtcgcctatgacggtaccacgtacggcggttggcaagtc
caaagcaatgcaccttccatccagcagcatttgatcatcgcgatcgaaaaggcgactggg
gagaaggtgcatgtacaagggagcggtcgaaccgattcgggagtccatgcgaccgggcag
gtcgcttctattcgattgcaaaattggagggcaccgcccgaacgattggtcccggcgatc
aatcgatttttgccgaggtccattgtggtccgatccgtgcagcacgtcgtcgacggcttc
gatgcgattcgcaatgcaaagagcaaacgatactgctactcaatctggaatgcgcgggtt
tcggacccactgcatgcccgagttcactggtgggtgccgcgacctctcgatgtcgaggcc
atgcaacgtgccgcagacttattgctaggcacgcatgattttaaagcgtttgagacccta
ggctctcctcgcaaatcgagcattcgaacgatctacgatttacccgttcggtcggttccc
tatctcgatggccaaaacatctccatcgagatggaggcggatgggtttttgtacaacatg
gttcgcaatatcgtcggagcgctgtgcgaagttggggtaggtcgattttcgccgcgctgg
atccagtccgtgttggagtccaagatgcgagattcttcgagccaaaccgctccgggccag
gggctttgtttggtttctgtccggtatcccgaaagttgttttattccattgggaacccag
gattcgcaagatatttccagctccaatcaaaattcttga
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