Pirellula sp. SH-Sr6A: VN12_22550
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Entry
VN12_22550 CDS
T04360
Name
(GenBank) ski2-like helicase
Organism
pir
Pirellula sp. SH-Sr6A
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Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
DUF3516
Helicase_C
IstB_IS21
DEXQc_Suv3
AAA_19
AAA
nSTAND3
nSTAND_NTPase5
PhoH
Sigma54_activat
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AMV34925
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Position
complement(5533635..5536094)
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AA seq
819 aa
AA seq
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MSVDRLDIAAEYFEKLAYTPYPVQEEAIYAYFSSDQGVLVCAPTGTGKTLIAEAAIYEAL
RTGKRCYYTTPLIALTDQKLLEIQQTALRWGYPIDSIGLVTGNRRVNPDAPVLVVVAEIL
LNRLMGQENDNFDDVASVVMDEFHSFNDPERGIVWELTLGLMPKHVRTMLLSATIGNSVE
FCSWLFRSHGRNLELVQGTERKVPLQFEWVDDAYLDEHLERIAEGDEAKRRTPGLVFCFN
REQCWQVSELLKGKKLIDKERQAIITKRIETFDFSKGAGPKLKQILIRGVGVHHAGIMPK
YRRLVEQLFQEKLLSVTVCTETLSAGINLPARSVVLPSIVKGPFGKKKIVEPSTAHQIFG
RAGRPQYDTQGFVYVLAHEDDVKYLRWKQQYDQIPEDTKDPNLLRAKKQLKKKMPTKRAG
ETYWTREQFEKLRNAPAAKLESRGMLPWRLLAYLLLNDSQVQPLRDLVGRRLQTADQIAK
GQKDLNRMLVTLWKAGFIELTPKPQPLQPTATPPSSQKKTTQPRWLDIDLPEAETEEDED
LPTAGSPLSEEEPIALDLESYRPELAVPTDRLAYLSQLRSINPIYGLYLVNMLQYADEGE
RIQALESVLELPANIAKIVRVPFPDQLPPGPLAHSILHPQLLSLGLASAAELTGRAEDEE
EEPDAEQLQAEAGGMKGRYRRWESRDEPPPRPLVLAEKLRRVFDYEFPGVHDVFTRGVWV
VGELLEFGGDFNKYIVARGLQKHEGLLFRHVLRFILLVEEIAQIAPSESKQEDWEDPLYA
LADRLVECCRSVDPESTDEILQGESKRPHPRSATKVSLE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgatcgactcgatattgcggcagagtacttcgaaaagctggcgtatacacct
taccctgttcaagaagaagccatttacgcttacttcagctccgatcagggagttttggtg
tgcgctccgaccggcaccggcaaaacgctcatcgcagaagcggccatctacgaagccttg
cgcacgggcaagcgttgttattacacgacgccgctaatcgccctaaccgaccaaaagctt
ttggagatccaacaaacggctttgagatggggctaccccatcgattcgatcgggttggtt
accggcaatcgccgggtgaatcccgatgctcctgttttggtcgtcgtcgctgagatcctt
cttaatcggttgatgggacaagaaaacgacaacttcgacgacgtcgcgtcggtagtcatg
gatgagttccattcgttcaatgatcccgagcgagggattgtttgggaattgacacttgga
ttgatgcccaagcatgttcgaaccatgcttctttcggccacgattgggaacagcgtcgag
ttctgcagttggctttttcggtcacacggtcgcaatttggaacttgttcaagggaccgag
agaaaagttcccttgcaattcgaatgggtcgatgatgcttacctcgatgaacatctcgag
cggatcgcagaaggtgacgaagcaaaacgtcgcactccaggattggtattctgctttaat
cgcgagcagtgctggcaagtttcggagctgctaaaaggaaagaagctcatcgacaaagag
cggcaggcgatcatcaccaaacggattgagacattcgacttctctaaaggcgcaggcccc
aaactcaaacagatcctcatccgcggcgtcggggtgcaccacgcgggcatcatgcccaag
taccgccgtctcgtcgagcagctttttcaagagaaattgctcagcgtcaccgtatgtacc
gagacgctttccgcggggatcaatctacccgcacggagtgtcgttctaccaagcattgtc
aagggtccgttcggcaagaagaagattgtcgagcccagcactgcgcatcagatatttggg
cgtgcgggacgccctcaatacgacacgcagggattcgtttatgtgctcgcacatgaagac
gacgtgaagtacctgcgatggaagcagcagtacgatcagattcctgaggacaccaaggat
cccaatcttcttcgcgccaagaagcagcttaaaaagaagatgccgacgaagagagcgggc
gagacgtattggactcgcgagcaattcgaaaagctacgcaatgcccccgctgccaaactc
gagagtcgcggcatgttgccatggcggctgctcgcctatctgcttctcaacgactcccag
gtgcagccgcttcgcgatcttgtcggacggagattgcaaaccgccgatcagattgccaag
ggccaaaaggacctcaatcgcatgctcgttaccctctggaaagcaggtttcatcgagctg
acccccaagcctcagccgttgcaacccaccgcaacccctccctcttcccaaaagaaaacg
actcagccacgttggctcgatatcgacctccccgaagccgaaacggaagaagacgaggac
ctgccaacggcgggatctcctctgagtgaagaggaaccgatcgcgttggatctcgaatcg
taccgtccggaattagctgtaccgactgatcgtttagcctacctttcgcagctccgcagc
atcaacccgatttacggactctatttagtcaacatgctgcagtacgcagatgagggggaa
cgtatccaagcgctcgagagcgttcttgagttgcctgcgaacatcgccaagattgttcgg
gtcccgtttccggatcaattgccacctggtccgctcgcccactcgatcttgcatcctcaa
ctcctctctctgggactggccagcgccgcagagctcaccgggcgagcggaggatgaagaa
gaagaaccggacgccgagcagcttcaggcggaggctggagggatgaagggtcgctatcga
cgttgggaaagtcgagacgaaccacctcctcggcccttggtgctcgcagagaaattgcgg
cgagtcttcgattacgaatttcctggcgtgcatgatgttttcacacgcggagtttgggtc
gttggcgagttgctcgaattcggtggcgatttcaacaagtacatcgtcgcacgagggctt
cagaaacacgaaggactgctgttccgacatgtgcttcgattcatactgctggtcgaggag
atcgctcagatcgcgccatccgaaagcaagcaagaggattgggaggatccactctacgcg
ttagccgatcgattggtcgaatgctgccgcagcgtggatccggaatcgacggatgaaatt
ttgcagggggaaagcaaacggccccatccacgatcggccactaaagtatcgcttgaatag
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