Pirellula sp. SH-Sr6A: VN12_22920
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Entry
VN12_22920 CDS
T04360
Name
(GenBank) Xylose isomerase-like TIM barrel
KO
K03079
L-ribulose-5-phosphate 3-epimerase [EC:
5.1.3.22
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00040
Pentose and glucuronate interconversions
pir00053
Ascorbate and aldarate metabolism
pir01100
Metabolic pathways
pir01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VN12_22920
00053 Ascorbate and aldarate metabolism
VN12_22920
Enzymes [BR:
pir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.22 L-ribulose-5-phosphate 3-epimerase
VN12_22920
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Motif
Pfam:
AP_endonuc_2
Glyco_hydro_114
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AMV34997
UniProt:
A0A142Y6Y3
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Position
5606505..5607560
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AA seq
351 aa
AA seq
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MQHESRSEIETTPSYPDSGSCLSAGSRSESLSGAPGRSGLPRRGFLGAAAVATALVAAPA
RGAMVAEVPKTIVPPEGKRVLLSCKLGMIAKKAGGKELSLVERLKMAADAGFDGVDFDEA
GAYTVEQAKAAVWEAGVFCHNAINHAHWQATLTNQDPAIRAKGVANIEHCIRVSHAIGGS
GVLIVIGKGEDGTPQECDERASSEIRKLIPLAASLGQPILIENVWNKIHYDHDKPPEQSA
ERFVKFVDSFNSRWVGMYYDIGNHWKYGQPREWLRQFGHRAVKLDVKGFSRAKNKFVDIT
SEDDDLPWGEVQAGLKEIGFAGWATAEVGGGDVERLTIVRKQMEKAFGLVG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatgaatcccgatccgaaatcgaaactactccatcgtaccccgactccggatcc
tgcttatcagccggctccaggtcggaatcgctctccggtgcaccgggtcgttccggattg
ccccgacgcggttttttgggtgcggctgcggtcgcaaccgcattggttgctgctccggcg
cgaggagctatggtagccgaagtgccgaagacgatagtgccgccggaagggaagcgagtg
ttgctatcgtgcaagctcgggatgattgcaaaaaaagcaggtggaaaagaattgagcttg
gtcgagcggctcaagatggcggcggacgctggatttgatggcgtcgattttgatgaagcg
ggggcatacacggtcgagcaagcgaaggcggcggtatgggaggcgggagtcttttgccac
aacgccatcaaccatgcccattggcaagccacgctgacgaaccaagatcccgcgattcgt
gcgaagggagttgcgaacatcgagcattgtattcgcgtttcgcatgccatcggaggatcc
ggcgtgttgatcgtgatcggtaaaggggaggatggaactccccaagagtgcgacgagcgc
gcttccagcgagatccgcaaactgatcccgcttgcagcgtcccttggacagccgatattg
atcgagaatgtttggaacaagatccattacgatcacgacaagccacccgagcaatcggcc
gaacgatttgtcaagttcgtcgatagtttcaacagccgttgggttgggatgtattacgac
atcggcaaccattggaagtatgggcagcctcgcgaatggcttcgccagttcggccatcga
gcggtgaagcttgatgtgaagggttttagccgcgcgaagaacaaatttgtcgacatcact
tccgaagacgacgatttgccttggggagaggtgcaggcgggactcaaggagatcggcttc
gccggatgggcgaccgcagaagtgggtggtggtgacgtcgagcggttgacgattgtccgg
aagcagatggaaaaggcatttggcctcgtcggctag
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