Pirellula sp. SH-Sr6A: VN12_23050
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Entry
VN12_23050 CDS
T04360
Name
(GenBank) hypothetical protein
KO
K02945
small subunit ribosomal protein S1
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
VN12_23050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pir03011
]
VN12_23050
Ribosome [BR:
pir03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
VN12_23050
Bacteria
VN12_23050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
RNase_II_C_S1
Spt6_S1
OB_RRP5_4th
OB_cyt-4
SH3_2
Motif
Other DBs
NCBI-ProteinID:
AMV35023
LinkDB
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Position
5670239..5671834
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AA seq
531 aa
AA seq
DB search
MSDANSLPEPVQDASSSQAAPAASTPAQPVPAAGGPINLDAIRRLRENQQGAASPRPEKR
GPKREAASTPGSVPKAESESQASDLPAESIDAEAQAPRYKSNKDKSNKDQSVPIAPKVPV
PSARVRFSDEDAALEDALSGANLDQLMIGDKSVQVGRRLEDGSRHPGKVLKVHNANVFIS
LGEPDQGVVNLLQFDEPPAEGLPVDVLIRSFNNEEGLYELSIPGETISVNDWDDLTEGGV
VEAKVESANTGGVECKVGNVRGFIPMSQLSEFRVESAADFVGQKLLCVITEANPRRGNLV
LSHRAVLEREKEAKRSERLASIQVGDHCDGTVRKVLEFGAFVDIGGLDGLIHITQLSWDK
IKHPSEVVKEGDQIKVRIDKIDPVTGKIGLSYRSAQDNPWNDVETRFPPGSVVRGAVSRL
ANFGAFVKLATGIEGLIHISELAHRRVASVSQVLQEGQEVEVKVLTVEPETQRIALSLRA
TQAKPEKESGGKAPEPEVEDVRRAPAVKKFEGPLKGGTGKNNGGELFGLKF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcgaactctcttccagaacctgttcaggatgcgtcttcttcccaggccgcg
ccggctgcttctactcctgctcagccggttcccgctgcaggtggccccatcaatctggat
gcaattcgccgattgagggaaaaccagcagggggcagcgtcaccgcgacccgaaaagaga
ggaccaaaacgagaagccgcttcgactcctggttctgttcccaaggcggagtctgaatcg
caagcatcggatcttcccgccgaatcgatcgacgcggaggcacaggctcctcgctacaaa
tcgaacaaagataaatcaaacaaagaccaatccgtccccattgctcctaaggtcccggtt
ccgagtgcccgagttcgtttctcggacgaagacgcagcgctcgaagatgccttgagcggc
gcaaacctggatcagctcatgatcggggacaaatcggttcaagtcggccgtcgattggag
gatggttctaggcaccccggtaaagtcctgaaagttcacaatgcgaacgttttcatcagc
ctcggcgaaccggaccaaggtgtcgtgaatctcctgcaatttgacgagcctcctgcggaa
ggactgcccgtcgatgtcttgattcgttcgttcaacaacgaagaaggcctctatgagttg
tcgattccgggcgagaccatctcggtcaacgattgggacgatctgaccgagggcggagtc
gtcgaagcaaaagtggaatcggctaacaccggcggggtcgagtgcaaggtcggtaatgtc
cgaggctttatcccgatgagccagctctccgagttccgggtcgaaagtgcagcggacttc
gtcgggcaaaaactcctttgtgtgatcaccgaagccaatcctcgtcgcggcaacttggta
ctgagtcaccgcgcagtattggaacgagaaaaagaggcgaaacggagcgaacgcttggct
tccatccaggtgggcgaccattgcgacggaaccgttcggaaggtgttggagttcggggcc
tttgtcgacattggcgggctcgatgggttgatccatatcacccagctttcctgggataag
atcaagcatccaagtgaagtggtgaaagaaggggatcaaatcaaagttcggatcgacaag
atcgaccccgttaccggcaaaattggcctctcttatcgatcggcacaagacaacccttgg
aatgatgttgaaacgcgtttccctcctggatcggtcgttcgaggtgccgtgtctcggctt
gcgaacttcggtgcctttgtgaaattggcgacaggaatcgagggattgatccatatttcc
gagctggcacatcgtcgcgttgccagcgtctcgcaagtgttgcaagaggggcaagaggtc
gaggtgaaggtcttgaccgttgaaccggaaacacagcgaatcgctctttcgcttcgtgcg
acccaagccaagcccgagaaggaatcgggtggaaaggctccggagcccgaggttgaagac
gtgcgccgagccccagcggttaaaaagttcgagggaccgcttaaaggtggcaccggcaaa
aataacggtggcgagcttttcggactgaagttctag
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