Pirellula sp. SH-Sr6A: VN12_23190
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Entry
VN12_23190 CDS
T04360
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pir
Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pir03110
]
VN12_23190 (clpC)
Chaperones and folding catalysts [BR:
pir03110
]
Heat shock proteins
HSP100
VN12_23190 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Sigma54_activat
UVR
ATPase_2
TniB
AAA_14
nSTAND3
AAA_7
NBD_SMAX1
NACHT
IstB_IS21
AAA_3
AAA_18
TsaE
Mg_chelatase
RsgA_GTPase
ResIII
nSTAND6
Zeta_toxin
T2SSE
DNA_pol3_delta2
AAA_23
AAA_24
Torsin
LUC7
MalM_C
Rav1p_C
HH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
AMV35051
LinkDB
All DBs
Position
complement(5706110..5708641)
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AA seq
843 aa
AA seq
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MYERFTDRARKVMQLANQEAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLDVDLRKIR
LEVEKLVQSGPEMVTIGKLPQTPRAKKVIEYSMEEARNLNHNYVGTEHILLGLLREQEGV
AAQVLMNLGMKLDDVREEVLNLLGHGMESAEVGERGGREGNNPSEPGASSKGGKSKTPAL
DSFGRDLTELARQGKLDPVIGREREIERATQVLCRRTKNNPVLLGEAGVGKTAIVEGFAQ
RVVNGEVPEILADKRIVVLDLAMMVAGTKYRGQFEERIKAVMNEVRRAKNTILFIDELHT
LVGAGGAEGAIDAANVLKPALARGEIQCIGATTLDEYRKYIEKDNALARRFQEIMVEPTG
TQETIQILKGLKERYEEHHRVQITDDAIAAAVEMSERYITARCLPDKAIDVIDEAGARVR
LRTMSKPPDLKDIDDEVERLNKEKEDAVANQDFEKAASLRDQADKLRRKKEQITRDWREK
SRETDGVVDEEVIAEVVSKMTGIPLTRLTTEDSLRLMNMEEELHKRVVSQDQAVSAVAKA
VRRSRSGLKDPKRPTGCFIFAGPTGVGKTLLAKALAESLFGDSDALIHIDMSEYMEKHNV
SRLIGAPPGYVGYEEGGQLTEKIRRRPYAVVLLDEIEKAHPDVFNMMLQVMEEGRLTDSF
GRNVDFRNTILILTTNAGAEAIKNESAFGFQKPDNDASYDSMKARVMDQIERVFRPEFLN
RLDDVIIFRHLNKEDLKKVIDFEMSKVKERLRDRGFDLILTDEAKEFIIKQGSNLDYGAR
PLRRAIEQRVEDPLSEELLRGTFEGKNTIIVEAFKDADGKVTRLEFKSESRETPASETAT
AAS
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaagatttactgaccgcgctcgcaaagtgatgcagcttgccaaccaagaggca
caacgattcaaccacgagtacatcggaaccgaacacatccttttgggtttggtgaaggaa
ggaagcggggttgcagcgaacgttctcaaaaacctagatgtcgaccttcgcaagattcgt
ctcgaagtcgaaaagctcgtccaaagtggcccggaaatggtcaccattggcaagctcccc
caaactcctcgcgcgaaaaaagtcatcgagtattccatggaagaggctcgcaacctcaac
cataactacgtcggcaccgagcacatcctgctcggtttgctccgagagcaagaaggggtc
gccgctcaagtcctgatgaacttgggcatgaaactagacgacgtgcgagaggaagtcctc
aatcttctcggccatggtatggaaagcgccgaagtcggagagcgcggcggacgagagggg
aacaacccctccgaacccggcgcatcgtccaagggtggaaagagcaagacgccggctctc
gatagcttcggtcgcgatctcaccgaactcgcccgtcaaggcaaactggacccggtcatc
ggccgcgaacgagaaatcgaacgcgccacccaagtcctttgccgacgcacgaaaaacaac
cccgttcttctcggggaagcaggggtagggaaaacggcaattgtcgaaggctttgcgcaa
cgtgtcgtcaacggcgaggtccctgagatcttggccgacaaacgcatcgttgtgctcgac
ttggccatgatggtcgccggaacgaagtaccgaggacaattcgaagaacgcatcaaagcg
gtcatgaacgaagttcgccgcgcgaagaacaccatcctcttcatcgacgaactccacacc
ctggtgggtgccggtggggccgaaggtgcaatcgacgctgccaacgttctaaagcctgcc
ctcgctcggggcgaaatccagtgcatcggagcgaccaccctcgatgagtatcgaaaatac
atcgagaaggataacgccctcgcgcgacggttccaggaaatcatggtcgaaccgaccggt
acccaggaaaccattcagatcttgaaaggtttgaaagagcgatatgaggagcatcaccgt
gttcaaatcaccgacgatgcgatcgctgctgccgttgagatgagcgagcgatacatcacc
gctcgatgcttgccagataaagcgatcgacgtcatcgacgaagctggggctcgtgtccgt
ctccgcacgatgagcaagccgcccgatctgaaggatatcgacgacgaagtcgaacgtctc
aacaaagagaaggaagacgccgtcgcgaatcaagactttgaaaaggcagccagccttcgc
gatcaagcggataagctgcgacgcaagaaagagcagatcacccgcgattggcgagaaaag
agccgcgaaacggatggcgtcgtcgacgaagaagtcattgccgaggttgtctcgaagatg
accggtattcctcttacccgtctcaccacggaagactccctccggttgatgaacatggaa
gaggagcttcacaaacgcgtcgtcagccaagatcaagcggttagcgcggtggcgaaggcc
gtccgacgcagccgttccggcctcaaggatccgaagcgtcctaccggctgctttatcttt
gcgggtccaaccggggttggtaaaacgctgttggcgaaagccctcgcggaatccctgttc
ggtgactccgatgcgctgatccatatcgacatgagcgagtacatggagaagcacaacgtg
agccggctcatcggtgcacctcctggttatgttggttacgaagaaggtggccagctgaca
gaaaagatacgtcgccgcccttacgcagtcgtccttttggacgaaattgaaaaggctcac
cccgacgtgttcaacatgatgttgcaagtgatggaagaaggacgtctgaccgacagcttt
ggtcgcaacgttgacttccgaaataccatcctcattttgactaccaacgcgggtgcggaa
gcgatcaagaacgagtcggcattcggtttccaaaaaccggataacgatgcgtcgtacgat
agcatgaaggcacgtgtgatggaccaaatcgaacgagtcttccgtcccgagttcctcaac
cgtcttgatgacgtcatcatcttccggcacctcaataaagaggatctgaagaaagtcatc
gatttcgaaatgtcgaaggtcaaagagcgattgcgagatcgtggattcgacctcatcctc
accgatgaagcgaaggaattcattatcaagcagggttcgaacctcgattacggagctcga
ccacttcgccgtgcaattgaacaacgtgtcgaagatccactctccgaagaacttctccgc
ggcaccttcgaaggcaaaaacacgatcatcgtggaagcgttcaaggatgcggacggcaaa
gtcacacggctcgagttcaagagcgagagccgagagactcccgcttcggaaaccgctacc
gccgcctcctaa
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