KEGG   Pirellula sp. SH-Sr6A: VN12_23480
Entry
VN12_23480        CDS       T04360                                 
Symbol
hsdR
Name
(GenBank) Type-1 restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pir  Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:pir00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pir02048]
    VN12_23480 (hsdR)
Enzymes [BR:pir01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     VN12_23480 (hsdR)
Prokaryotic defense system [BR:pir02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   VN12_23480 (hsdR)
SSDB
Motif
Pfam: ResIII SWI2_SNF2 DEAD HSDR_N HSDR_N_2 nSTAND3 AAA_25
Other DBs
NCBI-ProteinID: AMV35108
UniProt: A0A142Y7A3
LinkDB
Position
5772800..5774161
AA seq 453 aa
MNEAETRAEHIDPALAKAGWGVVEGSRIRREYPITLGRLEGFGRRGRALTADYVLIYRNT
KLAVVEAKAWEEAPSEGLAQAKNYAGKLAIRFTYSTNGQGIYAVDMQEGTEGEVDNFPTP
EELWNRTFAESNEWRDRFAEVPFEDRGGYFQGRYYQDIAIERVLSALADGNDRVLLTLAT
GTGKTFIAFQLAWKLFHSRWNLTDWKAKREPTRRPRILFLADRNILANQAYNAFSVFPDD
ALVRIDPADIRKKGKVPKNGSLFFTIFQTFMASGGTKSASMLTGSGQGISMAAEPPKFYF
GEYPPNFFDFIIIDECHRGGANDESSWRGILEYFSPAVQLGLTATPKRKNNIDTYEYFGE
PVFIYSLKDGINDGFLTPFKVKQISTTLDEYVYTADDTVVEGDIETGKRYEEKDFNKIIE
IKERERKRVEIFMSQIDQREKTLVLKQANACSS
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgaacgaagctgaaacccgagccgagcatatcgacccggcacttgccaaggctggctgg
ggtgtagtcgagggaagtcgcatccgacgcgagtatccaattaccttggggcgattggaa
ggatttggtcgtcgcggtagggcactcactgcggactatgtgctcatttatcgcaacacg
aaactggctgtggtcgaagcaaaagcttgggaggaagccccttcagaaggacttgctcag
gcgaaaaactacgctggaaaacttgcaatccgatttacctactcaacgaatggccaaggc
atctacgcggttgacatgcaagaaggcactgagggggaagtggacaatttcccaactccc
gaggaactgtggaacagaacctttgccgagtctaacgaatggcgagatcgattcgctgaa
gttccctttgaagaccgaggtggatactttcaaggacgttactatcaagacatcgctatc
gagcgagttctctctgcactagcagatggaaatgaccgcgtccttttgacgctcgcaacc
ggcacgggcaaaacttttatcgcgtttcaacttgcgtggaagctatttcacagtcggtgg
aaccttacggattggaaagcaaaaagggagccaacccgtcgaccaagaatactcttcttg
gcggatcgcaacatccttgccaatcaagcgtacaacgctttttctgtatttcctgatgat
gcactggtgcgaattgatcctgctgatattcgaaaaaaaggcaaagtccctaaaaacgga
agtctgttcttcacgatcttccaaaccttcatggcctcaggtggcacgaagtcagcatcg
atgttgactggttctgggcaaggcatttcgatggcagctgagccccctaagttttacttc
ggagagtatcctcccaacttcttcgatttcatcattatcgatgagtgtcaccgcggtgga
gcaaatgacgaaagctcctggcgagggatactcgaatatttctcaccagcagtgcagctt
ggattgacggccacaccaaaacgaaaaaacaacatcgatacctacgagtattttggcgag
ccagttttcatctattcgttgaaagacggaatcaacgatggattcctcacgccattcaag
gtcaagcaaatttcaacgactttggacgagtatgtctataccgctgacgatactgtagtc
gaaggcgacatcgaaacaggcaagcgatacgaagaaaaggacttcaacaagattattgag
atcaaggaacgtgagaggaagcgtgtcgagattttcatgagtcaaattgaccagcgtgaa
aagacgctagtcctcaaacaagcgaacgcttgttcgtcttag

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