Pirellula sp. SH-Sr6A: VN12_24955
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Entry
VN12_24955 CDS
T04360
Symbol
recD2_3
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VN12_24955 (recD2_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pir03032
]
VN12_24955 (recD2_3)
Enzymes [BR:
pir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
VN12_24955 (recD2_3)
DNA replication proteins [BR:
pir03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
VN12_24955 (recD2_3)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
VN12_24955 (recD2_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
Viral_helicase1
ResIII
AAA_16
DEAD
Helicase_RecD
AAA_22
SLFN-g3_helicase
AAA
NPHP3_N
MeaB
UvrD_C_2
nSTAND3
AAA_5
CBP_BcsQ
NTPase_1
CbiA
ABC_tran
NB-ARC
ATPase_2
PhoH
DO-GTPase2
Tautomerase_2
Motif
Other DBs
NCBI-ProteinID:
AMV35363
UniProt:
A0A142Y819
LinkDB
All DBs
Position
complement(6061237..6063012)
Genome browser
AA seq
591 aa
AA seq
DB search
MTPDQLIEFVLAEQRENEKQQKIYKLLSDDAMSHLGRAITGLMVTRTEKSPVTLECKHNE
SRIRPGSHVVLSASEHGRLTGEVTDVEEAGRVLRITLSRVPEDVFAGPWTLVELDRDFTP
LIVQSIKKLQPGQAGWSFFRWLTEDGATPLVKKITNANERQMVVEKVVSEFPFGVDASQR
CALEACVNEPSILGIQGPPGTGKTNLLAMVAEALSRLGRRVLILAPTHQAVNNALSAIRS
SFPKRKLVKVGNALRRESLPDDIECLLLKDAVRQDSSRTGSEQIIGMTFLSALQHLAVQS
SGLAPNVVLIDEAGQLPFCQGICAGLFGAGSTLLFGDDQQMPPVFNSEVSSSPLATSLFE
KLRQSHPSSILMLNTSYRLNEPICNFIADSFYGGVGKVISAASSRHRRLALPVGPNSTTE
FPVLAVLESKESLVWIRSEDNGSQQLNLAEADAVAKLVSTAIKSGLPSDQLAVVTPYRRQ
AAAIRRLIQYEVGSAVDVPIVDTVERVQGLTVELVTISMCTTDPEYASETASFIFSPNRL
NVAVSRARAKVVIFASESLLDALPTEYDGLVAMKKFQTALNRIATKEPSTI
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagatcaactaatcgagttcgtgcttgcggagcaacgggaaaacgagaagcaa
cagaagatctataaactgttgtcggatgatgcaatgagtcatcttggccgtgcgatcacg
ggactcatggtgactcggaccgagaaatcacctgtgacccttgaatgtaagcataatgaa
tcacgcatccggccgggtagccatgttgtgcttagtgcatcggaacatggacgcctcact
ggtgaagtgactgatgttgaagaagcggggcgagtgttgcgcatcacactttctcgggtg
ccagaggatgttttcgcagggccctggacattggtcgaactcgatcgcgattttacacca
cttatcgttcaatcgattaagaagttgcaacctgggcaggcggggtggtcattctttcgg
tggctaacagaggacggcgcgacaccgctggtgaaaaagattacgaacgcgaatgaacgc
cagatggtggttgagaaagtcgtttcggagttccccttcggtgttgatgcttcacagagg
tgtgcactcgaagcgtgcgtcaacgaaccttctattctgggaatccaaggcccgccagga
accggtaagaccaatctgttggccatggtggcagaggcactctctcggttaggccgaaga
gtgctgatcctcgcgcctacacaccaggcggtgaacaatgccctatcggccatccgatcg
tcattcccgaaacgaaagttggtcaaggttggtaacgcattgcgaagagagtcgctgcct
gatgacatcgagtgccttctattgaaagacgctgtccgccaagacagcagtagaactggt
agtgagcaaatcatcggtatgacgttcctgtcagcgctccagcaccttgccgtgcaatct
agcgggcttgcgccaaacgtcgttttgatcgacgaagccggacagttgccgttttgccaa
ggaatatgtgctgggcttttcggcgctggcagcacactgctatttggcgatgatcagcag
atgccgcctgtcttcaattcagaggtgagttccagtccattggccacttcacttttcgag
aaactaagacagtcgcatcctagctcgattctaatgttgaacacatcctaccgattgaac
gagccgatctgtaatttcatcgccgatagtttctatgggggagttggcaaggttatttcg
gcggcttcatcgcgccatcgccgactggcgttacctgtgggtccaaattccacaacggaa
ttcccggtcctcgctgtgttagagagcaaggaatcgttggtctggattcgatctgaagac
aacggatcgcaacaactgaatctcgctgaagcggatgccgtggcaaagctagtttcgacg
gcgatcaagtcgggactaccaagcgatcagctagctgttgtgacaccgtatcggcgacaa
gcagcagcgattcgacgattgatccagtatgaggtcggctccgctgtcgatgttcccatc
gttgacacggttgaacgcgtgcaaggccttacagttgaattggtcacaatctcaatgtgc
accacagatccagaatatgcatctgaaacggcatcgttcatcttctcgccgaatcgcctg
aacgtcgcagtaagtcgagccagagccaaagtggtcatcttcgcgtccgagagtttgctc
gacgcccttcctaccgaatacgacggtctcgttgcgatgaagaagtttcaaacagctttg
aatcgcattgcgactaaagagccgtccaccatctga
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