Pirellula sp. SH-Sr6A: VN12_25095
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Entry
VN12_25095 CDS
T04360
Symbol
kdpD
Name
(GenBank) Sensor protein KdpD
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VN12_25095 (kdpD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pir01001
]
VN12_25095 (kdpD)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pir02022
]
VN12_25095 (kdpD)
Enzymes [BR:
pir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
VN12_25095 (kdpD)
Protein kinases [BR:
pir01001
]
Histidine kinases
OmpR family
VN12_25095 (kdpD)
Two-component system [BR:
pir02022
]
OmpR family
KdpD-KdpE (potassium transport)
VN12_25095 (kdpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
DUF4118
HATPase_c
HisKA
GAF_3
Usp
GAF_2
HATPase_c_2
AAA_30
GAF
ResIII
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
AMV35391
UniProt:
A0A142Y878
LinkDB
All DBs
Position
complement(6084577..6087300)
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AA seq
907 aa
AA seq
DB search
MNEQERPTPEQMLARIRSDSDAAPFASSAGKLRLFLGYAAGVGKTYAMLQAAQAMKREGR
DVVLGYIEPHARPETQVLTEGLKVLPPLEVSYRGSILREFDLDTALASKPEFILVDELAH
TNAMGGRHAKRWQDVEELLAAGINVLSTLNVQHIESLNNVIAEISGVQVRETVPDSVLER
ADEVTLIDVSPDDLLERLRQGKIYVPTQAAFALEKFFRKHNLVALRELALRHAADRVHED
VEIARLGSASNRPWPTNERLLVCVGPSPSSAKVVRAAKRLADRLQSPWIALHIESSAAAR
WSDGDRQQLHRNLKLAESLGGEIVQASGDDVSQALIAYASSRNVTKIVVGKTGDTGHHWW
SRAASLVDRLLRDSGNMDVVVVRGLDEAQDASPGWHPNTSHGNVWTWLEAGCYTIVATII
TLLMNQVGFSEVNLVMVYLLSVVATAARLGRLPSIFSAIASVLAFDFLFTPPHYRITVYD
SQYLVTFAVMLIVGLLASSLTARIRNQAEIARRNERRAEALYRLSRRLANTARTTDLLRE
TEQIIAEVFDAHTVIYLPDKDRQVRPMLGHAASFAASAKEFATAQWVLDHNDPAGAGTNT
LPSSEAFYIPLSTPDNVAGVMAIQSSKPNQQISIDAKQLLETYATQIAFAIERNNLTERS
QRAELESETEKLRSSLLSAVSHDLRTPLAAIAGAASSLDANIQRESLDAGNHALLETIVD
ESQRLTRLVENLLHMTRLSSGNIQIHRQWLPVEEVIGSALHRLNPVLEGREIKVQMEGDM
PLIHGDEILLETLLVNLLDNALKYSPNQTPIEIKSEQVNDGIAIEVADRGSGIRPGDEIK
IFEKFNRGSGPNIDRRGTGLGLAICEAIVHAHKGTITARNRGGGGAVIRFTIPHDSIPPR
ITQDFDE
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcaagagcgaccgacgcccgagcagatgctggctcgaattcgttcggattcc
gatgcagctccattcgcatcctcggcaggcaagttgcgattgttcctgggctatgcggcc
ggtgtaggcaagacctatgcaatgcttcaagctgctcaggcgatgaagcgggaggggcgt
gacgttgtgcttggatacattgagccacatgctcgccccgagactcaggtcttaacggaa
gggctcaaagtattgcccccactagaagtttcataccgcggttcgatactacgggaattt
gatttagatacggcgctggccagcaagcctgagttcattctggtggatgagcttgctcat
actaacgcaatgggtgggcgtcacgcgaagcgctggcaggatgtggaagaactactcgca
gcaggaataaatgtcctttcaactctgaacgtacagcatatcgagtcgctgaataatgtc
attgctgaaattagtggagtccaggtccgcgaaacggtgccagattccgttctggagcgg
gctgatgaggttacgcttatcgacgtttcccccgacgatctcttggagcgtttacgccaa
gggaaaatctatgttcccacacaagccgcgttcgcgctagaaaagttttttcgcaagcat
aacctcgtggcacttcgggagttggcgttacgacacgctgccgaccgagtgcacgaagac
gtagaaatcgcgaggctcggaagtgcaagcaatcgtccttggccaaccaatgagcgattg
ctggtttgtgttggtccgagtccatcgtcagccaaagtggtgcgagcagccaaacggctt
gcggatcgtcttcaatcgccctggattgcattgcatattgagtcgtcggctgccgctcga
tggagcgacggcgatcgccagcagctccatcgcaatttgaagcttgccgaaagcctaggt
ggcgaaatcgttcaggcatccggtgacgatgttagccaagcgttgatcgcgtacgcttcg
agtcgcaatgtaacgaagattgtggttggcaagacaggtgataccgggcatcactggtgg
tctcgcgcagcgtcgttggtcgatcgattgctccgcgacagcggcaatatggacgtcgtt
gtggttcgaggtctcgacgaagcgcaagacgccagcccgggttggcacccaaacacgtct
catggtaacgtttggacttggcttgaggcgggctgctacacgattgttgcgaccatcatt
acgctattgatgaatcaagttgggttttcagaagtcaacttggtgatggtttacttgctt
tcggtcgtagcgactgcagcaaggcttggaagactgccttcgattttttccgccatcgcg
tcggtgttggcttttgatttcctgttcacgccacctcactaccggataacggtctacgat
agccagtacttggtcacttttgccgtgatgttgatcgtcggcctactggccagctctctt
actgctcgaattcgaaatcaagcggaaatagcccgtcgaaatgaacggagggccgaggcg
ctttatcgacttagtcgtcggttagccaataccgctagaacaacggatttgttgcgggaa
acggaacaaatcatcgcggaagtcttcgacgcacacacggtgatttatttgcctgacaaa
gatcgccaggtacgccccatgctgggacatgccgccagctttgcagcgagcgcgaaagag
tttgcgacagcacagtgggtgctggaccataacgatcctgccggtgctggaacaaataca
ttgcccagttccgaagcgttctatatcccactctctacccctgacaacgtggctggagtg
atggcgatccagtcgtcgaaacccaatcaacaaatttcgatcgatgcgaagcagctacta
gagacgtatgcaacacagattgcgttcgcgatcgaacgcaacaatttgacagagaggtcg
cagcgagctgaattggagtccgagacagaaaaactgcgcagttcccttttgagcgcagtc
tcgcacgatcttcggacccccctggcggcaatagctggtgccgcgagcagtctcgatgcg
aatattcaaagagagtcactcgacgctgggaatcacgcattgctggagacaatcgtcgat
gagtcgcaacggctgacacggttggtcgaaaacctgctgcacatgacccgcttatcaagc
ggtaacatccagatccatcgacagtggttgcccgtcgaggaagtgatcggttcggcgttg
caccggctcaatcccgttttggaaggtcgggagatcaaagtgcaaatggaaggagatatg
ccactcattcatggtgatgagattcttctggagacgctactcgtcaatctgctcgacaat
gcgttgaaatactcgccaaatcagacgccaatcgaaatcaagagcgaacaggtcaacgat
ggtattgccatcgaagttgctgatcgcgggagtggtatacggccaggggatgagattaaa
atcttcgaaaaattcaatcgagggtcgggcccgaatatagatcgtcggggcacaggatta
ggcttggccatttgcgaggcgattgtacatgcccacaagggtacaatcacggcgagaaac
cgcggaggcggcggggcggtgatacgctttaccattccgcacgattccattcctccccgc
atcactcaggacttcgacgagtaa
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