KEGG   Pirellula sp. SH-Sr6A: VN12_25495
Entry
VN12_25495        CDS       T04360                                 
Symbol
omcB_3
Name
(GenBank) Large cysteine-rich periplasmic protein omcB precursor
Organism
pir  Pirellula sp. SH-Sr6A
SSDB
Motif
Pfam: DUF11 SdrD_B DUF7619 TRAP_beta NPCBM_assoc DUF7507 CarboxypepD_reg SpaA CARDB bMG10 Ig_DR_A0283-like EMC7_beta-sandw Planc_extracel
Other DBs
NCBI-ProteinID: AMV35471
UniProt: A0A142Y8G2
LinkDB
Position
complement(6174406..6178491)
AA seq 1361 aa
MKARKPFEPITTQRFRFLKIQLGWSKRDMAGLWNQLIKRLSGNRAKQVQQVSRARSQRRL
RMEMLEGRALMAADITGTVFHDLTDNNIDGADPRLAAVSVALFRDGGNATYESGAGTSAA
GDDVLVGTTTSAATTGLYSFTVNQAGTYYVVQTSASGSLIQRPNARVQTINVSAGQVAGV
SVQTIDSFNDTSQTVTASTSGTNPDFNSIAATEALGGERDLFANATSGSLSIEVDNPSTT
NQVVFNVGAGANGVRQIVYDGADGDAQLLDNDGLGGVDLTSGGTANGFRLTIGGEAGTSI
TITVNSGANASSRTVAIPTTGGGAPTDTLEILFADFTTSAGTGADFEDVGALTFEVTGPD
AADVTIDLIETFGPTVLTQNIANLSPMTIGDLVFADLDNDGLFDSSGTNPDVGLANVTLQ
LFTDTNSNGTFDDGVDQQTTNSAGNPVSTTSDSSGNYLFTNVLPGSYFVVIPSSQFATGQ
AAAGYIASSTTPAGQPNNANTAANITGVGVVTALVTLAATAAPTDDGDTDNNTDLSNDIG
LVPQYDLTVEKTSTSTSAPAGTTITYTINARNDGPSPATDVSLTDNIPDGVQIVSVTSNV
NTDVITIPASAQDTIAANPDDIVIEVGNLAASATTQRTITVVAFVLPETVGTGTPESIEN
TVTIAGFGTELTTLPNTDALSLPVTRNAILELTKTATPTTAVVGSNITYTLTMRNTGPAT
ARNVVINDTLPDGLDLVSVTSNVGTATGTQGTSGNPDSIEVTVANVNVDSPSTDTDVVVT
IVATVLNSISGSTIANTGSADSDDSAGVTANANTPLARNVDLAITKSITTNPASTATPAT
AAPNSTFTYTIVARNDGPSAATTVRVTDNLPDGIRIISATSSDGTDTITIPASAQDTTAT
NPDDLIIEVGNLDVGSANQTTITIIGVVLPGTTGTFTNVATIAATDTTGNIEADTSDNSA
SVAANAPRTVDLAVTKTGPATAVSGNTITYTMSAVNNGPSDAVNVQVSDDIPDGLRIISA
TVNGSPVTIPASLSDTNASNPDNLVLAIGALASGATNNTIQIVAAILPSSTASLVNSAVI
STTDTATVETPNTNNASTVTTTLTQQNDVAITKTGPSTLPAGSTITYTMNVTNNGPSSAT
SVNVSDTLPTGVTFVSGTSLIGSTAAGTVASGANNSATVTIPTLAPGETAVVTILATVSA
TSTGSITNTVTVTAANDTVSTNNTSTASTTLTAPLPSNITGRIYVDSNRDGVGQSTESGI
AGVTVTLTGTPTGGSTSITQTTTTNANGEYTFSNVAAGTYAVTSGNPNDFNFQAANPGST
GGTAGVRQITAIPLAATNSTANNVGFVRVFSKRLFLSSSTR
NT seq 4086 nt   +upstreamnt  +downstreamnt
atgaaggcaaggaagccgttcgaacctataacgacccagaggttccgcttcctgaagatt
caactgggatggagcaagcgtgacatggcaggcctctggaatcaactcatcaagcgtttg
agtggcaatcgagcaaaacaagttcagcaagtttctcgtgctcgatctcagcgacggctg
agaatggagatgctggaaggccgcgcactcatggcggcggacatcaccggcactgtcttc
catgacctcaccgataacaacatcgacggtgccgatccccgtctcgcggctgtctcggtt
gccctctttcgcgatggcggcaacgctacctacgaaagcggagctggcacttcggccgct
ggcgacgatgtcttggtcggcacgacaacttctgccgcgacgaccggcctttactccttc
accgtgaatcaagccggaacgtactatgtcgttcagacatccgcctccggcagcttgatc
caacgcccgaatgctcgcgttcagaccatcaacgtttcggcagggcaagtcgccggggtc
agcgtccaaacaatcgactcgttcaacgacacttcgcagaccgttacagcatctacttcg
ggaacgaaccctgacttcaattccatcgcagctacggaggcgctggggggtgaacgagat
ctgttcgcaaacgcaacatcaggcagcttgagcatcgaagtcgataacccatcgaccacg
aatcaagtagttttcaatgtgggtgccggtgcaaacggtgttcgtcaaatcgtctatgac
ggggccgatggtgatgcacagcttctcgacaacgatgggcttggcggtgttgatctcacc
tcgggtggaacagccaatggcttccgattgaccatcggtggtgaggcaggcacctcgatc
acgatcacggtcaacagcggagccaatgcttcgagccgtaccgttgcaatccccaccacg
ggaggtggcgcaccgaccgataccctggagatcctcttcgcagacttcacgaccagcgct
ggcaccggtgctgacttcgaagatgtaggagctctcaccttcgaagtaactggccctgac
gcggccgacgttacgatcgacctgattgagacctttggccccaccgtcctcacacagaac
atcgccaacctatcacccatgaccatcggtgatctggttttcgcggatctcgataatgac
gggctgtttgactcctccggaaccaaccccgatgttggcttggccaacgtcacgctccag
ctctttaccgacaccaacagcaacggcacgttcgacgacggtgtggatcagcagacgacc
aatagcgccggcaatccggtgagcacgacttccgatagcagcggaaactatctgttcacc
aacgttcttcccggcagctacttcgtggtgataccctcgagccaatttgctactggacaa
gccgcagcgggatatatcgctagctccaccactccagctggtcaaccgaacaacgcgaac
accgcagcgaatatcacgggtgtcggcgtcgtaaccgcattggtcaccctggccgcaacg
gctgcgccaaccgacgacggagatacggacaacaatacggatctcagcaacgatatcggt
ttggtaccccagtacgacctaactgtggagaaaacgtcgacatccacttccgctcccgca
ggcaccacgatcacctatacgatcaacgctcgaaacgatggtccttcgcccgcaaccgat
gtgagcctcaccgacaacatccctgacggtgtacaaatcgtttcggtcacttccaacgtc
aacacggacgtcatcaccattcccgccagcgcacaagacacgattgccgcgaatccggac
gatatcgtaatcgaagtcggcaacttggccgcgagcgcaacaacacaacgcactatcact
gtggttgcttttgttcttccagagaccgtcggaaccggtacgccggaatccatcgagaat
acggtcacgatcgcaggcttcggtacggaactaaccacgcttcccaacaccgatgcgctt
tccttaccggtaacacgcaacgcaattctcgaactgaccaagacggccactccaacgacc
gccgtggtggggagcaacatcacctatacgctgacgatgcggaatacggggccagcgact
gctcgcaatgtcgtcatcaatgacaccttgcccgacggtctcgatttggttagcgtcaca
agcaatgttggaaccgcgacggggacccagggaacaagtgggaatccggacagcattgaa
gtcaccgttgccaatgtaaacgttgattctccaagcaccgacaccgacgtggtcgtaacc
atcgtcgctaccgttctcaactcgatctcgggctcgacgattgctaacaccggttcggcg
gactccgatgactccgccggcgttaccgccaacgcgaatactccgctcgctcgaaacgtc
gacttggcaatcaccaagtccattacgactaacccagcctccacggcaacccccgcaacc
gccgctcctaactcgacattcacctacacgattgtcgcgagaaacgatggcccatcggct
gcgaccaccgtccgcgtaacggacaatctcccggatggtatacgcatcatcagcgcgaca
tcctcagatggaaccgatacgatcaccattcccgcctccgcgcaagacacgacggccacc
aatccagatgacttgatcatcgaagtagggaacctggacgtcggctcggcgaaccaaacc
acgatcacgatcattggggtcgtactccctggtacgacgggaacctttaccaacgttgct
accatcgcagcgaccgatactacggggaacatcgaagccgacacttcggataactctgcg
agtgtcgctgcgaatgcaccgaggacggtcgatttggccgtgaccaagacgggaccagcg
accgccgtttccggaaacaccatcacgtacaccatgtccgctgtgaacaatggtccttcg
gatgccgtgaacgtacaagtctccgatgacattcccgacggactacgcatcatcagcgcg
acggtaaacggatcacccgttacgatcccagccagcttgtcggatacgaacgcttcgaat
cccgataacttggtcctcgcgatcggagccctagcctcgggtgctaccaacaatacgatt
caaatcgtagctgcaatcctaccgagcagcactgcttctttggttaacagtgcggttatc
agcacaaccgacaccgcaacagtggaaactccgaacacgaacaacgcgtccacggtgacg
acaacgctgactcagcaaaatgacgtcgccattacgaagacgggaccatcgacccttcct
gcaggtagcacgatcacctacacgatgaacgtgaccaataacggtccttcgtcagccacc
tcggtaaacgtttcggatacgctgccaactggagttaccttcgttagcggaacatccttg
atcggatctacggcagccggtacggtcgcatccggtgcgaacaattcggctacggtcacg
atcccaaccctggctcccggcgaaactgcagtcgtgacgatcttggccacggtttccgcc
acctctacaggatcgattaccaacacggtcacagtgaccgctgccaacgatacggtctcg
accaataacacgtcgacggcgtcgactacgctaaccgcccctcttccttcgaacatcacg
gggcgtatttatgtcgatagcaaccgagacggtgtcggacaatcgaccgagagcggaatc
gcaggagtgactgtgacgctgacgggtacccccaccggcggatcgacctcgatcacgcaa
acgacgaccaccaatgcgaacggggagtacacgttctccaacgtcgcagccggcacctac
gcggtgacgtcgggcaatccaaacgacttcaatttccaagctgcgaaccccgggtcaacg
ggtggtactgcgggcgttcgacagatcacggccattccgcttgcagcgaccaactcgacc
gccaacaatgtcggtttcgtccgggtctttagcaaacgattgttcctgtcctcatcgaca
cgataa

DBGET integrated database retrieval system