Pirellula sp. SH-Sr6A: VN12_26890
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Entry
VN12_26890 CDS
T04360
Name
(GenBank) ATP-dependent helicase HepA
Organism
pir
Pirellula sp. SH-Sr6A
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
ResIII
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
AMV35748
UniProt:
A0A142Y954
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Position
complement(6476150..6479476)
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AA seq
1108 aa
AA seq
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MTNLAQLDPPKATGLIVHILQAIAQLERKIRPQQLLMARYYSSNDIPRLKRAESTLQWDF
ELQGVSPVRGQYNTSILFDLDTRHLSASVDDPSVRVVRQLSAQCSCTEEIKPCVHQIFCL
HYLRRNLSQKSTDDAMQWMESCITDGRHAGKKFVESLDYLKVPELEPSEEEPQERERLTR
IQWRVAFTQHSVRINPYLQTMRKRGGWNKGRLVRESLDTVDETTLSHASDRTLVLLLQAA
EESYRGQTPRMIRECFKLLYDHPNVTLDDENQTPIRIRECPLEVRVEEESETYRPSVFQG
DYQIVSTQDAANCSIGSINNNESVMFRLDRDQRCILVSTLDQKMKRLIDDLQMAERREAV
FDQETAERFADLVAAAANPLQVQINLPERLAGPEQPLEPNIELHLSPFAKESLMVSLRVA
CDLVREAPVPGMEPDRLRVATAAGRFQLLRALEEEAMRADEVAGVLELGRLSYESPYTWI
AETPDEALDLIQRIQQLGEDAPTVCWPKSQPMRIIGEITPQRLQVRLTSQRDWFGVEGVA
QLEGLEIPLAELLAALRGGRRFVPLGDGQFAMISEQLRQRLNSIQDVSSTESGQIRVSRA
ATAVIEEALGTDITYEADSSWRDALDRLRTAKTLQPKVPENLMADLREYQKSGYSWLARL
AHWGIGGCLADDMGLGKTVQTLGVLLDRSNKGAALIIAPTSVGSNWQREAERFAPSLKPK
LYREHDRQTLIDSAGPGDLIITSYQLLQRDVDRFTARSWYTLVLDEAQFIKNFQTKTAQA
VRQLDADWRIALSGTPLENHLGELWSLMRTVSPGLLGSWDRFRKNFAEPIERQGNRDRLQ
ALGRVVRPFILRRTKKEVLSELPERTEVVRYAELSTEERKKYDSARLAAINELTQPEGED
SDSQMRIRVLAWLTRLRQLSCHPALVDKRWTESSAKLDLFMEIVEELREGEHRALVFSQF
VQHLSLLREALDKTGVTYQYLDGSTPAAKRQEAVDRFQAGEGDLFLISLKAGGTGLNLTA
ADYVIHMDPWWNPAVEDQATDRAHRIGQQRAVTVYRLVAKDTIEQQILALHADKRELISG
VLDGADRAGRMSTDELVSLIRLSQVETV
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttggcacaactggaccctcccaaggcgaccggattgattgtccatatactc
caagcgattgcgcagctcgagagaaagatccgccctcagcaactgctgatggcccgatat
tactcctccaacgatattcctcgtctcaagcgtgcagagtcgacgctccagtgggatttc
gagctgcaaggtgtctcgcccgttcgcggtcagtacaacaccagcatcctgtttgatctc
gatactcgccacctgagcgcatcggtcgacgatcccagcgtgcgcgttgtccgtcaactc
agcgcccagtgctcgtgcaccgaagagatcaaaccctgtgttcaccagatcttctgcttg
cactatctacgccgcaacttgagtcaaaaatcgaccgatgatgcgatgcaatggatggag
agctgcatcaccgatgggcggcatgccggcaaaaagttcgttgagtcgctcgactacttg
aaagtccccgagctggaaccgagcgaagaggaaccacaggagcgggaaagattgacgcgc
atccaatggagagtcgcgttcactcagcattccgttcggatcaatccatacttgcaaaca
atgcgaaagcgaggaggctggaacaaagggcgactggttcgcgaatccctcgacaccgtc
gacgaaacgaccctgagccacgcctcggaccgaacgctggtcctacttcttcaagccgcc
gaggagtcctaccgtggccaaaccccacgtatgattcgcgagtgctttaagctgctttac
gatcatcccaacgtaacgctcgacgatgaaaaccaaactcctatccgaatccgagaatgc
cctctcgaggttcgcgtcgaagaagaatccgaaacgtatcgacccagcgtcttccaaggg
gactatcagattgtttcgacgcaagatgctgccaattgctcgatcggaagcatcaataac
aatgaatcggtaatgtttcgtttggatcgagatcaacgctgcatcttggtcagcacgctg
gaccaaaagatgaagcgtctgatcgacgatttgcagatggcggagcgacgcgaagcggtt
ttcgatcaagagacggcagagcgatttgcagatctggtcgccgctgcggcgaatcccctt
caagtccagatcaatctgcccgaacgattggccggtcccgaacaaccgcttgaaccgaac
atcgagctgcatctttcgccatttgcaaaagaaagcttgatggtctccctccgcgtggct
tgcgacttggttcgcgaagcgccggtccccggcatggagccggatcgattgcgagtcgcg
actgcagccggacgattccaattgctgcgcgcgttggaagaggaagcgatgcgagccgat
gaagtcgcaggggtgctcgagctaggtcggctctcctatgaaagcccctacacctggatt
gccgaaactccggacgaagcattggacttgatccaacgcatccagcagcttggagaagac
gcaccgacggtctgctggcctaagagtcaaccgatgcgaatcatcggcgagatcacgccg
cagcgacttcaagttcgactgacgagccagcgagactggttcggagtcgaaggcgtcgcg
caactagaaggccttgaaattcccctcgcggaactcctcgcagcactccgcggcggtcgg
cgattcgtgccattgggggatgggcaattcgccatgatatcggagcagctccgacaacgg
ctaaacagcatccaagatgtttcgagcaccgaatccggacaaattcgcgtatcccgagcc
gcgactgcggtcatcgaggaagccctcggtacggatatcacctacgaagcggattcgtcg
tggcgcgatgcgttggaccgccttcgtaccgcaaagacgctgcaacctaaagttccagag
aacttgatggccgatttgcgcgagtatcagaagtcaggctacagctggcttgctcgtcta
gcacactggggaatcggcggatgcttggcggacgacatgggtctcggaaagaccgttcaa
acgctgggtgtgttgctcgatcggtcgaacaaaggggcggcgttgatcatcgctcccacg
agcgtcggctcgaactggcaacgcgaagcggagcgatttgctccttcgctcaagccaaaa
ctataccgggaacatgatcgtcaaactttgatcgatagcgctggacctggggatttgatc
atcaccagctaccagttgctccaacgagacgtcgaccgattcaccgcccgatcttggtac
accctcgtgctggacgaagcccaattcatcaaaaactttcaaacgaaaacggcacaagcg
gttcgacagctcgatgcggactggagaatcgcgctttccggtaccccgctcgaaaatcat
ctgggcgaattgtggagcctgatgcggaccgtgagccctggattgctagggtcgtgggat
cgcttccgaaagaacttcgcagagccgatcgaacgccagggaaatcgcgatcgcttgcaa
gctctcggtcgcgtggttcgccccttcatcttgcgacgtaccaaaaaggaagttttgtcg
gagttgccggaacgaacagaagtcgttcgatacgccgagctttccaccgaagaacgaaag
aaatacgactccgcacgattggccgcgatcaatgaactcacgcaacccgaaggagaagac
agcgactcccaaatgcgcattcgcgttctcgcgtggttgacgcgattgcgacagctctct
tgccaccccgccctggtcgacaagcgctggacggaatcgtctgccaaactcgatctcttc
atggagatcgtcgaagaacttcgcgaaggggaacaccgcgcattggtctttagccaattc
gtacagcacctgtccctgctccgcgaagcgttggacaaaacaggcgttacctaccaatac
ctcgacggttcgactccagccgcaaaacgccaagaagccgtcgatcgcttccaagcaggt
gaaggggacctcttcttgatctccctcaaagcaggtggaaccggtctcaacttgaccgcc
gccgactacgtgatccacatggatccatggtggaacccagccgtggaagatcaagcgacc
gaccgagcccaccgcatcggacaacaacgcgccgtgacggtctaccgactcgtcgccaag
gataccatcgaacagcagattctcgcactccatgccgacaaacgagaactgattagcggt
gtactcgatggtgcggatcgcgcgggtcgtatgtcgaccgacgaactcgtctcattgatc
cgactcagtcaggtggaaaccgtctaa
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