Pirellula sp. SH-Sr6A: VN12_26930
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Entry
VN12_26930 CDS
T04360
Symbol
uvrA_3
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VN12_26930 (uvrA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pir03400
]
VN12_26930 (uvrA_3)
DNA repair and recombination proteins [BR:
pir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VN12_26930 (uvrA_3)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VN12_26930 (uvrA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_16
AAA_23
nSTAND1
AAA_25
AAA_33
AAA_22
UvrA_inter
DnaJ_CXXCXGXG
cobW
RNA12
Nudix_N_2
DUF4434
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AMV35756
UniProt:
A0A142Y977
LinkDB
All DBs
Position
complement(6488857..6491811)
Genome browser
AA seq
984 aa
AA seq
DB search
MAKKSRSSNSSSPSVSSYDASGTSILEASNPATIALRTSMGGPAIHLRGACQHNLKSLNI
DFPLRQLTVLCGVSGSGKSSLAFDTLYAEGQRRYIESFSAYTRQFLQRLDKPSFDSLEPL
PPSIAVTRDSRARNNRSTVGTASEILEYLRNVFSKTASLFCPQCGQPVQAHSPNTILDVL
STRTSGRAMVGFEIAWKSTDELAMLLADLQSSGFVRLVVQNSTVNLGSSDRAELVEQFKN
VQRATVIVDRLSWTGTREERWLQSLGVCMDQAALHDDSIGIVFLESESGTETIDGKSFDR
LAFSPVLRCVPCNIDYPAAEPSLFNFNHPLGACRECEGFGETIAIDPNKVVPNKTLSLRD
GAIAPWNTPSYSHELQELLALAPDVGIPTDVPVSKLTKAQWRHIEEGVPSHRFGGLKGFF
AWLEKKKYKMHVRVFLSRWRTYSTCKSCEGKRLSHEALAYRLADCSFADLCSLSINRLAQ
LIRESTQSRSIQTAHEDHFSSDTPSNFWLAAEEQAQYNASEPVRQVLSRLEYLQDVGLGY
LSLDRPLHTLSSGESQRVNLTTLLGSSLVDMLYVFDEPTVGLHTADVDRVAQAILKIRDR
GNTVILVEHEPSMMKLADRILEIGPGAGEFGGEVVFDGAPEALMQSDSVTGKYLRGEKPR
RSIRRSGEKFIKLSGAAGRNLQGIDIEIPLGCFTVITGPSGSGKSTLILDTLLPACSKAA
GKEGPIPLPFQSVTGVKSLGGFRSLDQSPIPRSSRSTPATYCKAMDAIRNAFADTPDAKS
RKWSASHFSFNSESGRCEHCEGLGCITVEMQFMADVALPCPDCLGKRFKPEVLDVTYRDR
NIHDVLQMSVSTASDFFRGETEIQSRLQLLIDIGLDYLPLGQNLSTLSAGESMRLKLATI
LSETNRSKRGELIAMDEPTTGLHFVDIDRLLDCFDILLEKGHTLVVIEHNQQLIDAADFV
IELGPGAGPDGGQVVRQSVRGNHS
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaatcgcggtcctcgaattcctcttctccatccgtttcctcgtacgacgcc
tccgggacgagcatccttgaggcaagtaaccccgcgaccattgcgctgcgaacgagcatg
ggcggacctgccatccacctgcgaggagcgtgccaacacaatctgaagtcgctaaatatc
gatttcccgctccgacaactgacagtgctttgcggggtgagcgggagcggcaaatcgagc
ttggcgttcgataccctctacgcggaaggccaacgccgctacatcgagagtttctctgcc
tacactcggcagtttctacaacgactggacaaacctagcttcgacagcctcgaaccgctt
cccccttccatcgccgtgacccgcgactcgcgcgctcgaaacaatcggagcacggtgggc
actgctagcgagattctggaataccttcgaaacgtcttctctaagaccgcttcgctgttc
tgcccccaatgcggtcaacctgttcaagcccattcgccaaataccatcctcgacgtgttg
agcacccgcacatcaggacgcgcaatggtgggattcgagatcgcctggaagtcgaccgat
gaacttgccatgctcctcgccgaccttcagtcgagtggattcgttcgccttgttgtccaa
aattctacggtcaacttagggagctcggatcgcgctgagcttgtcgagcaattcaaaaac
gtccaacgcgcgaccgtgattgtagatcgactctcgtggacgggaactcgggaagaacgc
tggctacagtccctcggcgtgtgcatggatcaagcggcgttgcatgatgattccatcggg
atcgtctttctagaaagcgaatcgggcacagaaacgatcgatggaaagtccttcgaccgc
ctagcattctctccggtgctgcgatgtgttccatgcaacatcgattatcccgcggcagaa
cccagtctcttcaatttcaatcatcccctgggcgcttgccgagaatgcgaaggatttggc
gaaacgatcgctatcgacccaaacaaggtcgtaccgaacaaaacactgagtctgcgagac
ggtgcaatcgctccatggaacaccccatcctattcgcatgagctccaagaactcttggcg
ctcgcccccgatgtgggaatcccaacggatgtcccggtgtccaaactcaccaaggctcag
tggcgccatatcgaggaaggtgtcccatcccatcgcttcggtggattgaaaggattcttc
gcttggctcgaaaagaaaaagtacaagatgcacgtccgagtcttcttgtcgcgatggcgc
acctattccacctgcaaaagctgcgaagggaaacgattgagccatgaagcactcgcctac
cgattggcggattgctccttcgccgacctctgctctctttcgatcaaccgcctcgcgcaa
ttgatccgcgaatcaacccaatcccgatcgattcaaaccgcccacgaagaccatttctcg
tccgatacgccatcgaacttttggctcgcggccgaggaacaagctcaatacaacgcatcc
gaaccagttcgacaagtcctttcgcgtctggaataccttcaagacgttggtttgggctat
ctctccttggaccggccgctccacactcttagcagcggcgagagccaacgagttaatctc
acaaccctcctcggttccagcttggtcgacatgctctacgtctttgacgaaccgaccgtc
ggattgcacaccgccgatgtggatcgagtcgcccaagcgattctcaagatccgcgatcga
gggaatacggtcatcctcgtagagcacgaaccctccatgatgaagctggccgaccgcatc
ctcgaaatcgggccaggagccggtgagttcggaggagaagtcgtctttgacggagcgccc
gaggcattgatgcaatcggacagtgtcacgggcaagtaccttcgtggggaaaaacccagg
cgttccatccgaagatcgggcgaaaagttcatcaaactctcgggtgcagcggggcgcaat
ctccaaggcatcgatatcgaaatccccctcggatgcttcacggtcatcaccggaccgagc
ggatcgggaaagagtacgcttattttggatacgctcctccccgcatgctcaaaagctgcg
ggaaaagaaggtcccatccctttgccttttcagtctgttacaggagtgaaatcgctgggc
ggatttcggtcgctcgaccaaagcccaatccctcgctcgtcgcgatcgacccctgcgacg
tattgcaaagcaatggacgcgatccgaaatgcatttgcggatacgccggatgcaaagagt
cgaaaatggagcgcgagccacttttccttcaacagcgagtcagggcgatgtgaacactgc
gaaggtttaggatgcatcacggttgagatgcagttcatggcggatgtcgctctcccatgc
cccgactgtctcggaaagcgattcaaaccggaagtactcgacgtgacgtatcgagatcgc
aacattcacgatgtgcttcagatgagcgtttccactgcatccgatttctttcgcggcgaa
actgaaattcaaagccgcttgcaacttctgatcgatatcggcctcgattaccttccttta
ggtcaaaacctatcgacgctctccgcaggcgaatcgatgcgactgaaattggcgaccatc
ctttcggaaacgaatcgatccaaacggggtgagctgatcgcgatggatgaaccgactacc
ggcttgcactttgtcgatatcgatcgactcctcgattgctttgatatcttgctcgagaaa
ggacacacactggtcgtgatcgaacacaaccagcaactgatcgatgccgccgacttcgtc
atcgaactagggccgggtgcgggccccgacggtgggcaagtcgttcggcagtccgttcgc
gggaatcactcgtaa
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integrated database retrieval system
