Pyrobaculum islandicum: Pisl_0303
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Entry
Pisl_0303 CDS
T00444
Name
(GenBank) peptide chain release factor subunit 1 (aeRF-1)
KO
K03265
peptide chain release factor subunit 1
Organism
pis
Pyrobaculum islandicum
Pathway
pis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Pisl_0303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pis03019
]
Pisl_0303
03012 Translation factors [BR:
pis03012
]
Pisl_0303
Messenger RNA biogenesis [BR:
pis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Pisl_0303
Translation factors [BR:
pis03012
]
Eukaryotic type
Release factors
Pisl_0303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
baeRF_family10
eRF1_1
eRF1_3
acVLRF1
Ribosomal_L7Ae
DUF6841
DUF2529
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ABL87481
UniProt:
A1RR99
LinkDB
All DBs
Position
complement(304030..305187)
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AA seq
385 aa
AA seq
DB search
MSFKRPPNGVYYIKTPVELRAFINLLKKFRGYATTLITLYINSERPIPDVVNLLRSEWST
ASNIKDKTTRTHVQDTLERIINNLKGEAKAPENGMAIFAGFHMINQGNYEWVYYVVVPPQ
PIYTFKYICDTAFHTEILEDQIHAGVVYGIVVVERGEAVIALLKGGQWEVVKTVEFFVPG
KHHAGGQSANRFKRQTEHLAETFYKVLAEEVNKIFLQIPTLKGIIVAGPGPTKEDFLEEG
GLDYRLKDKVLAVVPACCANEYGVIEAIKNAQEQLKESEYVHAKEVMEKVMYYAVRKSDY
IVYGKERALKALEMGMAEVLVVAEELGEDAVLEVIMKAEEKGVKVEVVPKGVEESKTLMQ
AFGGYVALLSTPVWVLEQQIQAEAA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaaaggccgccaaatggcgtttactacatcaagacgccagtggaacttagg
gctttcataaatctcttgaagaaatttagaggctacgccacgacgttgatcaccctctat
ataaactcggagaggccgataccagacgtggtcaaccttctcaggtcggagtggtctact
gcttctaacatcaaagacaagaccaccaggacccatgtccaggacacactagagcgtata
ataaacaacctgaagggggaggctaaggcacctgaaaacggcatggctattttcgcgggg
ttccatatgataaatcagggaaattacgagtgggtctattacgtcgtcgtgcctcctcag
ccgatctacacttttaagtacatatgcgatacggctttccataccgagatactggaggac
cagatacacgccggcgttgtatacggtattgtcgtcgtagagaggggggaggctgtcatt
gcgcttctaaagggagggcagtgggaggttgtgaagactgtggagttcttcgtgccgggt
aaacaccacgccggcggccagtcggcgaatcgcttcaagcggcagacggagcacttggcg
gagaccttctacaaggtgctggccgaggaggtgaacaagatcttcctccagataccgacg
ctgaagggcataatagtggcagggccaggccccaccaaggaggacttcctagaggaggga
ggtctcgactacaggctcaaggacaaagttctagcggtggtgccggcttgttgcgccaac
gaatacggcgtgatagaggcgataaaaaacgcccaggagcagctcaaggagagcgaatat
gtccacgccaaggaggtcatggaaaaggtgatgtactatgcagtgagaaagagcgactat
atagtatacggcaaagagagggcgcttaaagctctagagatggggatggcagaggttcta
gtcgtggccgaggaactcggcgaagacgcagttctagaggtgatcatgaaggcggaggag
aagggagttaaggtagaggttgtgccaaagggcgtcgaggagtctaaaacgctgatgcaa
gccttcggcggatacgtggcgcttctctccactccagtgtgggtattggagcaacagatc
caggcagaggcggcgtag
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