Pyrobaculum islandicum: Pisl_0345
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Entry
Pisl_0345 CDS
T00444
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pis
Pyrobaculum islandicum
Brite
KEGG Orthology (KO) [BR:
pis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pis03016
]
Pisl_0345
Enzymes [BR:
pis01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Pisl_0345
Transfer RNA biogenesis [BR:
pis03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Pisl_0345
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
SPL
DUF1450
Motif
Other DBs
NCBI-ProteinID:
ABL87523
UniProt:
A1RRE1
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Position
340253..341500
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AA seq
415 aa
AA seq
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MGRIYVETYGCWLAKADAEILRQRLGYEQVSNVDEADVILVYTCAVREDGEVRQLARIRE
LVKLGKELIVAGCLARLRPYTIKSLAPHAKLIYPSEIEGGKERSMKTLPKYERGLIYTVP
LQVGCLGNCTFCATKYTRGGAGYVKSADPDDVVRHIKEAVAKGAREIYLTGQDVITYGFD
AGWRGGWTLPDLLDRILKEVEGEYRVRIGMSEPWIFEKFVDQLLDIIKRDHRVYRYFHLP
VQSGSDKVLVAMGRKYTVEEYRGLIRRIRRELGDNVFIATDIIVGFPGETEEDFQETVKL
VEELQFDKIHVARFSPRPFTEAAVMPRQVPDAEKKRRSKILSEVAMRIAHLRNGAQVGKR
DVVLIDEVDHGLVVGRASDYRQVVVKRGAGDGLLGEFVNVRIAAASPVYLYGEIL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgggccgtatctatgtagagacatatggctgttggctagctaaagcagatgccgaaatt
ttacgacagagactaggctacgaacaagtttctaatgtagatgaggcagacgtaatttta
gtatatacatgtgctgttagagaagatggagaagtgcgacagttggctagaattagagaa
cttgtaaaactggggaaagagcttatagtggctgggtgtctcgcaagacttaggccatat
acaataaaatctctagccccacatgccaagttgatctacccctcggagatagagggcggg
aaagagcgcagcatgaagacattgcctaaatacgagagggggcttatatatacagtgcca
ctacaagtgggttgtcttggcaattgtaccttttgtgcaactaaatacactaggggaggc
gcggggtatgtaaaaagcgcagatccagacgatgtagtacgccatataaaagaggctgta
gctaaaggcgcgcgcgagatttatctaacgggacaagacgttattacctacggttttgat
gccggttggagaggcggctggacgcttccagacctactcgatagaatcctaaaggaggtc
gaaggtgagtatagagtgagaattggaatgtctgagccttggatatttgaaaaatttgta
gaccagctattagacattataaagagagaccacagagtctatagatatttccacctccct
gtccaatctggaagcgacaaagtgcttgtcgcgatgggtaggaagtacactgtagaggaa
tatagaggtctcatacgtaggataagacgggagctcggcgacaacgtctttatagccact
gacataattgtgggatttcccggcgaaacagaagaagactttcaggaaactgtcaagctt
gtggaggagctacagtttgacaaaatccacgtggcgagatttagccccaggccttttaca
gaagccgcagtaatgcctagacaagtgccagacgccgagaagaagaggcggagtaaaatc
ttgtcggaagtagccatgaggattgcccatttgagaaacggcgctcaagtgggaaagaga
gatgttgtgttaatagatgaggtagaccacggccttgtggtggggagggcgagcgactat
agacaagtggtggttaagagaggagccggcgacggactattgggagagtttgtaaacgtt
aggatagccgcagcaagtccagtgtacctttacggcgaaatcctctag
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