Pyrobaculum islandicum: Pisl_0573
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Entry
Pisl_0573 CDS
T00444
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
pis
Pyrobaculum islandicum
Pathway
pis03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pisl_0573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pis03021
]
Pisl_0573
Transcription machinery [BR:
pis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Pisl_0573
Prokaryotic type
Archaeal type
TFB
Pisl_0573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_Ribbon_TF
TFIIB
Zn_ribbon_tTFIIB
HTH_24
DUF7577
Cyclin_C
Zn_ribbon_RRN7
Zn_ribbon_LysW
ZNF512_C2HC
Lar_restr_allev
Zn_ribbon_3
Ribosomal_S27e
DUF7351
DUF1539
Zn_ribbon_IS1595
ArfGap
Motif
Other DBs
NCBI-ProteinID:
ABL87751
UniProt:
A1RS19
LinkDB
All DBs
Position
complement(527673..528569)
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AA seq
298 aa
AA seq
DB search
MTRKLIFEVEEHRCPVCGAVNDVVVDYERGQVICKNCGTVLREGVADLGPEWRKPESSRA
YSGPIGSSMGDIEFGNVKIADKLKALSLKKFARPISTPLERIEVDIREFLEAAKQKLNIP
KAVIEDTVMLYKKLYDAGYRAPRLEGYAAALYFTLKKHGVAAITLRSLAENLGINRSSFI
SAYMELMRVANKLGIKPPRIDPKIYIPRIVSALGIGDEKSAEVQRIAVDILRYILSSPRI
RNGRKPQVLAASAVYYACYIAGVEVTQKELAKATDTTEGPIRDLLKELSEILYIEVTV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgactagaaagctgatatttgaagtagaggagcaccgctgcccggtgtgcggcgcagtt
aatgacgtagttgttgattacgaacgtggacaagttatatgtaagaattgcggaactgtc
ttaagagagggagttgcagatttaggccctgagtggaggaaacctgagtcatcaagggcg
tattcaggccccataggctcctctatgggagatatagaattcggcaatgtgaagatagcc
gataaacttaaggcgcttagcttaaagaagtttgcacgacctatctctacaccacttgaa
cgcatagaggtagacataagagagtttttagaagctgcaaaacagaagcttaacatccca
aaagctgtgatagaggatactgtcatgttgtataaaaagttatatgatgctggatatcgg
gcgccaagacttgaggggtatgctgcagctctatatttcacgctcaagaaacatggggta
gccgcaattactttaaggagcctagcagaaaacctcggaattaaccgttcgtcttttatc
tcagcatatatggagcttatgcgtgttgcaaataaacttggtataaaaccgccgcgtata
gatccaaaaatatacatacccaggattgtatcggcgttgggtataggcgacgagaaatct
gcagaggtgcaacgtatagccgtggatatattacgctatattttatcatcaccacgtatt
agaaatggaagaaagccgcaagttctcgcagcatccgctgtttattacgcctgttacata
gccggcgtagaggtgactcagaaagagctggcaaaagctacagataccacggaaggacct
atacgagatctattgaaagaactctcggagatcctatatattgaggtcacggtgtag
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