Pyrobaculum islandicum: Pisl_0683
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Entry
Pisl_0683 CDS
T00444
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pis
Pyrobaculum islandicum
Pathway
pis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Pisl_0683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pis03019
]
Pisl_0683
03009 Ribosome biogenesis [BR:
pis03009
]
Pisl_0683
04131 Membrane trafficking [BR:
pis04131
]
Pisl_0683
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pis04147
]
Pisl_0683
Messenger RNA biogenesis [BR:
pis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Pisl_0683
Ribosome biogenesis [BR:
pis03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Pisl_0683
Membrane trafficking [BR:
pis04131
]
SNARE
SNARE associated proteins
Others
Pisl_0683
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Pisl_0683
Exosome [BR:
pis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pisl_0683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_22
AAA_5
AAA_33
AAA_14
AAA_28
AAA_2
AAA_lid_PRS2_C
Vps4_C
IstB_IS21
nSTAND3
AAA_18
Mg_chelatase
UFD1_N2
RNA_helicase
AAA_24
DUF815
AAA_7
Sigma54_activat
ABC_tran
PhoH
Zeta_toxin
ATPase
NPHP3_N
Parvo_NS1
AAA_17
SLFN-g3_helicase
AAA_19
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
ABL87861
UniProt:
A1RSC9
LinkDB
All DBs
Position
complement(621919..624114)
Genome browser
AA seq
731 aa
AA seq
DB search
MSEWIELRVLESKARDANRPIVRIDPEVMERAGIIVGDVVEIVGRRRTAAKVWNGLPEDR
GKGVIRMNSILRKNADVTLNETVRVRKIEPKPAAFVKLAPVSMTIAVDTNFLQYIKQRLR
EYIVVEGDMLQIYVLSQPLTFQVVQTKPANAVLVITEDTQIQIFEKPVSGVRIPHVTWED
IGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAY
FVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVV
AQLLTLMDGLQERGQVIVIGATNRPDAIDPALRRPGRFDREIWINPPDFKGRYEILLIHT
RNMPLAPDVDLRKLAEMTHGFSGADLAALAREAAMSALRRAIQSGLIDLNQPSIPPEALE
KIKVTMSDFINAMKEIIPSALREIHIEVPRVRWEDIGGLENVKQELREAVEWPLKYPDKF
KKFGLRAPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREIF
RKARMAAPAVIFIDEVDALATARGLGGDSLVSERVVAQLLAEMDGIKALENVVVIAATNR
PDLIDPALLRPGRFDRIIYVPPPDFKARLEILLIHTKATPLAKDVDLEELARRTEGYSGA
DLELLVREATFLALREDINVREVSMRHFEEALKKVRPSITPEMLKFYESWLEKARQLTVA
VKTKATPPLYL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaatggattgaacttagggtacttgagagtaaagctcgcgatgctaaccgtccc
atcgttagaatagatcctgaagttatggaaagagccggcattattgtcggcgatgttgta
gagatcgttggacggaggaggacagcggcaaaggtttggaacggtctcccagaagaccgc
ggcaaaggcgtaatcagaatgaacagcattttaagaaagaacgctgatgtaaccctaaac
gaaacagtgagagtgaggaagatagagcctaagcctgccgcctttgtaaagctcgcccct
gtgtctatgactattgcagtagataccaacttcctccaatacatcaaacagagacttaga
gaatacatcgtagtagagggcgatatgctacagatatatgtgctgagccagccgcttacg
tttcaagtggttcagacaaagccggcaaacgccgtgttagtcatcacggaggacacccag
atccagatttttgaaaagccggtttcgggcgttaggataccccacgttacttgggaggat
attggtgatttggaggatgctaaacagaagattcgtgagcttgtggagcttcctcttagg
catcctgagttgtttaaacatttgggtattgagcctccgaagggtatcctcttgattggc
ccccctggcacgggcaagactctcctcgccaaggctgtggctaacgaggccaacgcctac
ttcgtcgctataaacggccccgagatcatgtcgaagtactacggcgagtctgaggcgcgg
cttagggagattttcgaagaggcgaagaaaaacgcccccgccataatcttcatagacgag
atagacgccatagcccccaaacgcgaggaagtcacgggagaggtagaaaagcgagtggtg
gcacaactactaaccctaatggacggactacaagagagaggacaagtaatagtaatagga
gcaaccaaccgcccagacgcaatagacccagcactaagaagaccaggaagattcgacaga
gagatttggataaacccgccggactttaaaggtaggtatgaaatccttctcatacatact
aggaatatgcctcttgcacctgacgtagatctgagaaagctagccgagatgacacacggt
ttttctggggccgatctcgccgcacttgctagagaggctgctatgtctgctctaagaaga
gctattcaaagcggtcttatcgaccttaaccaaccctctatcccgcctgaggctcttgaa
aaaatcaaagttactatgtcagacttcataaacgccatgaaagagataataccatctgct
ctaagagagatacacatagaagttccccgtgtccgttgggaggacataggcggcttagaa
aacgttaaacaggaactcagagaggccgtggagtggcctctcaaataccctgataagttt
aagaaattcggtctccgtgctcctaagggcattctcctatttggaccacctggcacagga
aagacactactggcaaaggcggtggccacagagtcgggggcgaacttcatcgccgtcaga
ggtccagagatattttccaagtgggttggcgagtcggagaagatggttagagagattttt
agaaaagcccgcatggctgcaccagcggtcatctttatagatgaggtagatgcacttgca
acagcaagaggtctaggcggagattccttagttagcgaacgcgttgttgcgcaactacta
gctgaaatggatggtataaaagcgcttgaaaatgtagtagttatagcagctaccaatagg
ccggaccttatagatccggcgttgttaagaccaggccgtttcgatagaataatctacgtc
ccaccgcctgattttaaagccaggcttgaaatattgctaattcacaccaaggcaactcct
ctagctaaagacgtcgacctcgaagagttagcacgtagaaccgagggctactctggcgca
gacttagagctattggtaagagaggcaacgttcttggcattacgcgaggatataaacgtc
agagaggtttcaatgagacactttgaagaggcacttaaaaaggtcagaccctcgattact
ccagagatgttaaaattctacgaaagttggttagaaaaagcgagacagttgacggtagcc
gttaagactaaagcgacgcctccactatatctatga
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