Pyrobaculum islandicum: Pisl_0884
Help
Entry
Pisl_0884 CDS
T00444
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pis
Pyrobaculum islandicum
Brite
KEGG Orthology (KO) [BR:
pis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pis03400
]
Pisl_0884
DNA repair and recombination proteins [BR:
pis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pisl_0884
Archaeal homologous recombinant proteins
Pisl_0884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_29
ABC_tran
CATRA-C
GAS
DUF4349
AAA_27
DUF1664
PK_C
Img2
HEF_HK
Rad50_zn_hook
Occludin_ELL
Mod_r
Motif
Other DBs
NCBI-ProteinID:
ABL88060
UniProt:
A1RSX8
LinkDB
All DBs
Position
complement(790306..792678)
Genome browser
AA seq
790 aa
AA seq
DB search
MWRIEKIELENFRSYKGRHEVSLGDVTILLGRIGAGKTSLLYAIEYALFGKQLEVRERVA
KLVDLINVDAQEANVALELRRGNDKLRIERRLGRRGSEKLVVLYNGIKLRDRDAEERLVE
LIGADEDIYERLVYISHRTLEGFIYGTAQKRTLSVDRLFGIDIIDNILRVVSSIEKYLLE
KAENLRKRLSTYEKYRDIIKKYGGYKGVVTRLETIEGELAALKEREVNLTKTVEELAKRR
AGYLEKIRENENILLEYYKTRSELEILESTTGEDVGLDAVEKIRDALQEALEEYEHILGH
ELLEKLTTRDLESLSAAMVEAYEALVRLSKDLESQISEVRKTYEQYLARVKKLEDEIKEV
ETKLRRLERSYIRFKELQKSFQSLETAKAALNELKRRLEETEKSMAYISALKTVSLYIAE
IGVNRCPICGSPISREVALNIAREVESKFGELIHEVENLKERIREYEKAVDEMEILSGEV
AEYLSTKNRLEELKLEREEIIKKMIQAEKALKQLERRVEKLHSLITRVDKRTILDALSKY
GKMLRVRELKRRLKELEEMLNKAGVVREILDVEMRWREITEELERTSSRLAELYREKAVL
EEIVREVGGDAENLKKALDNTLYAYSKLQEVKAKFELVKVNARARLVEIAKSRFNEVFLT
LYRYGDISKVNVDLEQRKGYYDFYAISPTGERYGISKLSDGQRLSIALALALALREISNI
QIGFIIFDEPIPYVDVNIRRAFAELVRSLSSRYQIVVATQSGDFADVIKDAVPNARLYMV
TKEESSRVAE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggatagaaaagattgaactagaaaatttcaggtcatacaaggggagacatgag
gtaagcctaggggatgttacaattttattgggaagaatcggggctgggaagacctctctc
ctatatgccatagaatatgccctctttggaaaacagcttgaggtaagagagagagtagca
aaacttgtagatctgattaatgtagacgctcaggaagccaatgtagcgctagaattacgc
agaggcaacgacaaacttcgtatagaaagaagactagggcggcggggatctgagaagctt
gttgtactttataacggcattaaactaagagatagagatgctgaagaaagactagttgaa
ctcataggagccgacgaagacatatatgaacgacttgtatatatttcgcataggactcta
gagggttttatatacggcacagcacaaaagagaacgctttcagtagaccgtctatttggt
attgacataattgacaacattttaagagttgtgtcatctatagagaaatatctgttggag
aaagccgaaaatttgagaaaaagactttctacatatgaaaaatatagagatataattaag
aaatatggtggctataaaggcgttgtaactaggttagagactatagaaggtgagctggcg
gcgttaaaagagcgcgaggtaaatcttactaaaacagtagaagagttagccaagagaaga
gccggctatttggagaaaatcagagagaacgagaacattttattggagtattacaaaacg
agatctgaattagagatcttggaatcaactacaggcgaagatgttggtttagacgccgtt
gagaaaattagagacgctctgcaagaggccttagaggagtatgaacatatactggggcat
gagcttcttgaaaaactcacaactagagacctagaatctttatcggctgccatggttgaa
gcttatgaggcccttgttagattatcaaaagatttagagagtcagatttctgaagtacga
aagacatacgaacagtatctagctagggtgaagaagcttgaagacgaaattaaagaagtt
gagactaaactgaggagacttgaaaggtcatatatacggtttaaagagcttcagaagtcg
tttcaatctctagaaacggctaaagctgccctcaacgagttgaagaggaggctcgaagaa
actgagaaatctatggcatatatttcggctcttaagacggtatctctctatattgcggaa
ataggcgtcaatagatgtcctatatgcggctctcccataagtcgggaggttgcgttaaac
atagctagagaggtagagagcaaatttggcgagttaatacacgaagtagaaaatctaaag
gagaggattagagagtatgaaaaagctgtagacgaaatggaaatattaagcggcgaggtt
gcagagtatttatccacaaagaatagactagaggagttaaaacttgagagagaagaaatc
attaagaaaatgatacaggctgaaaaagcacttaaacaactagagagacgtgttgaaaaa
ttacactctttgataactagggttgacaaacgcacgattttagatgcgctttctaaatat
ggaaagatgcttagagttcgagagctaaaacgccgccttaaagagcttgaggaaatgtta
aacaaagccggcgtcgttagagaaatcttagatgtggaaatgcgctggagggagattacc
gaagagctagagagaacttctagccgtttagcagaattatacagagagaaggctgtatta
gaagagattgtaagagaagtggggggagatgcggaaaatttgaaaaaggcactagataac
acgctttatgcctatagcaagctacaagaagttaaggcaaagtttgaacttgtcaaagtc
aacgcgagagctcggttagtggagattgcaaaatctcgctttaacgaagtatttctaacg
ctctatagatatggcgatatttcaaaagtaaatgtagatctagaacaacgtaagggctac
tacgacttctatgcgatatctcccactggcgagagatacggtatttcaaagctaagcgat
ggacaaagactttcgatagctctagccctagctctcgcgcttagggaaatatccaatata
caaattggctttataatatttgacgaacctattccatatgttgatgtaaatatcaggaga
gctttcgcagaattagttagatctctttcttcacgttatcagatcgtagtagctacacag
tctggcgattttgcagatgtgataaaagacgcggttccaaacgcaagactatatatggtg
actaaggaggaaagttctagagttgcagagtaa
DBGET
integrated database retrieval system
