Pyrobaculum islandicum: Pisl_0921
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Entry
Pisl_0921 CDS
T00444
Name
(GenBank) DNA-directed RNA polymerase subunit E, RpoE2
KO
K15171
transcription elongation factor SPT4
Organism
pis
Pyrobaculum islandicum
Brite
KEGG Orthology (KO) [BR:
pis00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Pisl_0921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pis03021
]
Pisl_0921
03019 Messenger RNA biogenesis [BR:
pis03019
]
Pisl_0921
Transcription machinery [BR:
pis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Pisl_0921
RNA polymerase I system
Pisl_0921
Messenger RNA biogenesis [BR:
pis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Pisl_0921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
DZR
UPF0547
Zn_ribbon_15
HypA
Zn_Ribbon_1
Zn_Ribbon_TF
Zn_ribbon_3
NRDD
DUF1451
Zn_ribbon_IS1595
Zn_ribbon_NUD
OapC
DUF7575
Zn_ribbon_TFIIS
Motif
Other DBs
NCBI-ProteinID:
ABL88097
UniProt:
A1RT15
LinkDB
All DBs
Position
complement(821982..822203)
Genome browser
AA seq
73 aa
AA seq
DB search
MSTRKRTLAGYKACKQCKFVVPEDAKQCPNCGSEEFVYKWRGMIAVIDPAKSCIAKRLGI
DKPGIYALELVEE
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgagaaagagaacgcttgcggggtacaaggcctgtaaacagtgtaagtttgta
gtgccagaagatgcaaaacaatgtcccaactgcggctcggaagagtttgtatacaaatgg
cgaggtatgatagcagtcatagacccggcaaagtcttgcatagcgaagagactaggcatt
gacaagccagggatctacgccttagaactcgtcgaagagtga
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