Pyrobaculum islandicum: Pisl_1167
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Entry
Pisl_1167 CDS
T00444
Name
(GenBank) Radical SAM domain protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
pis
Pyrobaculum islandicum
Brite
KEGG Orthology (KO) [BR:
pis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pis03016
]
Pisl_1167
Enzymes [BR:
pis01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
Pisl_1167
Transfer RNA biogenesis [BR:
pis03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
Pisl_1167
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-ProteinID:
ABL88335
UniProt:
A1RTQ3
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Position
1057702..1059111
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AA seq
469 aa
AA seq
DB search
MEKPLRFIRMASGVHVVAVMTHPFPCPGRCSFCPSAAGVPKSYMPDSPVVLRAGRSGFDP
YRQVVGRVKVYLDNGHMPSKVEVVVMGGTFSALPRWYREWFIGNVFKALNDYPSWAAGAD
PSPDLELEQRRNEGARIRLVALTVETRPDYVDVGEVDFLLRLGVTRVELGVQSIYDDVLA
RVDRGHGVAEVVRATALLKDSAYKVCYHLMPGLPGSDPDRDLEMFREVFSNPDFMPDCVK
IYPTYVVPGTRLYEEWRRGGYRSYGEDTWLDLLAKIYASVPRWARVMRLGRDIPLHHVVD
GPRWGNMRQVVLKRMEQLGLKCVEIRCREVGIKLANGVYVEPGPVEIKRHIYEASRGVEV
FLEAVGPDDTLYGILRLRMPYKPHRPELVGQTALVREIHVYGPEVPVGEEGVWWQHVGIG
RSLMERAEEIAALEFSAKKVAVISGVGARPYFRKLGYERCGPYMCKELR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagcctctgcggtttattaggatggccagtggggttcacgtagttgccgtgatg
acgcatccctttccctgcccggggaggtgtagcttttgcccctctgcggctggggttccc
aagtcgtatatgccggatagtccggtggttttgagggctgggcgtagtggttttgacccc
taccggcaggtggtggggcgggtgaaggtgtatctcgacaacggccacatgccctctaag
gtggaggtggtggttatgggcgggaccttctcggctttgcctaggtggtatagggagtgg
tttattggcaacgtgtttaaggctctcaacgactaccccagctgggcggctggggccgac
ccttcgcctgacctcgagcttgagcagcggcgtaacgagggggcgcggatccggctggtg
gctttgactgtggagacgcgccccgactacgtcgacgtgggagaggtggacttcctcctt
aggcttggggtgacgcgggtagagctgggagtccagtctatctacgacgacgtgttggcc
cgggtcgatagaggccacggcgttgccgaggtggtgagagccacggcgcttctgaaggac
tcggcgtataaggtgtgttaccacctaatgccggggctccccggaagcgacccggaccgc
gacctggagatgtttagggaggttttttcaaatccagacttcatgccggactgcgtcaag
atatatcccacgtacgtcgtccccgggacgaggctgtatgaggagtggaggcggggcggc
tataggagctacggcgaggatacgtggctcgatctgttggcgaaaatctacgcctctgtg
ccgaggtgggccagggttatgaggctggggagggatatacctctgcaccatgtcgtcgac
ggcccgaggtggggcaatatgagacaggtggtgcttaagcggatggagcagctaggtctt
aaatgtgtcgaaataaggtgtagagaggttggcataaagcttgccaacggcgtttacgta
gagccggggcctgtggaaataaagagacatatctatgaagcttctcgcggcgtggaggtc
tttttagaggctgtggggccggacgacactctatatggcatacttaggctgaggatgccg
tataagccgcataggccggagctcgttgggcagacggcgttggtgagagaaatacatgta
tatggcccagaggtgccggtgggggaggagggggtctggtggcagcacgtgggcataggc
agatctctcatggagagggctgaggaaattgccgcgttggagttctcagcaaagaaagtc
gctgtgataagcggcgtgggggccaggccctacttcaggaagctcggctatgagagatgt
ggcccctacatgtgtaaagagcttagataa
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