KEGG   Prevotella intermedia: PIN17_0408
Entry
PIN17_0408        CDS       T02058                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pit  Prevotella intermedia
Brite
KEGG Orthology (KO) [BR:pit00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pit02048]
    PIN17_0408
Enzymes [BR:pit01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PIN17_0408
Prokaryotic defense system [BR:pit02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PIN17_0408
SSDB
Motif
Pfam: SWI2_SNF2 EcoR124_C T1R_D3-like ResIII HSDR_N DEAD SNF2-rel_dom DUF4028
Other DBs
NCBI-ProteinID: AFJ07626
LinkDB
Position
I:complement(427570..430413)
AA seq 947 aa
MPVQSEAALENGLIATLQQMNYEYVQIEEEKNLRTNFKSQLEKHNRKRLEETGRTEFTEA
EFEKILIYLEGGTRFEKAKKLRDLFPLELDDGERLWVEFLNRTHWCQNEFQVSHQITVEG
RKKCRYDVTILINGLPSVQIELKRRGVELKQAYNQIQRYHKTSFHGLFDYVQLFVISNGV
NTRYFANNPNSGYKFTFNWTDAANVPFNELEKFATNFFDKCTLGKIIGKYIVLHEGDKCL
MVLRPYQFYAVEKILDRVKNSNNNGYIWHTTGAGKTLTSFKAAQLVAELDDVDKVMFVVD
RHDLDTQTQSEYEAFEPGAVDSTDNTDELVKRLHGNSKIIITTIQKLNAAVSKQWYSRRI
EEIRHARIVVIFDECHRSHFGDCHKNIVRFFDNTQIFGFTGTPIFVENAVDGHTTKEIFG
NCLHKYLIKDAIADENVLGFLVEYYHGNVDVDNASQNRMTEIAKFILNNFNKSTFDGEFD
ALFAVQSVPTLIRYYKIFKSLDPKIRIGAVFTYASNSSQDDALTGMNTGSYVSESTSEAD
ELQAIMDDYNDMFGTSFTTENFRAYYDDINLRMKKKKKDMKPLDLCLVVGMFLTGFDSKK
LNTLYVDKNMDYHGLLQAFSRTNRVLNEKKRFGKIVCFRDLKSNVDASIKLFSNSNNLED
IVRPPFNEVKKNYQELTTNFLEQYPTPSSIDLLQSEKDKKLFILAFRDVIKKHAEIQVYD
EFEEDAADLGMTEQQFMDFRSKYLDIYDTFASGCKPSEGNQTPDEDTGSTETSTESGIDD
IDFCLELLHSDIINVTYILELIADLNPYSADYKEKRTYIIDTMIKDAELRNKAKLIDGFI
QQNVDDDRDNFMARKQKFDGTSDLEERLNDYISTERNNAIDALAKDEGLDVSILNHYLSE
YDYLQKEQPEIIQEALKEKHLGLIKTRKSLTRVMDRLRSIIRIFNWD
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgccagtacaaagtgaagctgctcttgagaacggacttattgctactcttcagcaaatg
aactatgaatatgtacagattgaagaagaaaaaaatctccggacaaatttcaaaagtcaa
cttgagaaacataacaggaagagattggaagaaactggacgcaccgagtttaccgaagcc
gaattcgagaaaatcctgatttatcttgaggggggcacacgttttgaaaaggcaaaaaaa
cttcgtgacctctttccgctagaactggatgatggagaacgtctgtgggtggaatttctg
aaccgcacccactggtgtcagaacgagtttcaggtttcccatcagattactgttgaagga
agaaagaagtgtcgttatgacgtgacgatactgataaatggtttaccttcggttcagata
gagctgaagcgcagaggggtagagttgaagcaggcttacaaccaaatacaacgctatcac
aagacctcgttccatggactgtttgactatgtgcagctgtttgttatctccaacggagtg
aacacgcgctattttgccaacaacccgaatagtggctacaaattcacgttcaattggaca
gatgcggctaatgttccttttaatgaactggaaaagtttgccaccaatttctttgataaa
tgtacgttaggcaagataataggcaagtatatcgtactacacgaaggagataaatgcctg
atggtgttgcgtccttaccagttttatgccgttgagaagatacttgatcgtgtgaagaat
tccaataacaatggctatatatggcatacaactggtgcgggaaaaacgctgacttcattt
aaggctgcccagcttgtagccgaattggacgatgtggacaaggttatgtttgtggttgat
aggcatgaccttgacacacagacgcagtccgaatatgaggcatttgagccaggtgctgtt
gacagtaccgataacacagatgaacttgtgaagcgccttcatggtaattccaaaattatc
atcaccaccatccagaagctcaatgccgctgtaagtaagcagtggtatagcaggcggatt
gaagaaatccgtcatgctcgtatcgtggtgatttttgatgagtgtcatcgcagtcatttc
ggagattgccataagaatatcgttaggtttttcgacaatacacagatattcggatttaca
ggtacacctatcttcgttgagaatgctgtggatggtcatacaacaaaggaaatcttcggc
aactgcctccacaagtatctgataaaggatgctattgctgatgaaaatgtacttggcttc
ctcgtagaatattatcatggcaatgtcgatgtagataatgctagccaaaaccgtatgacg
gaaattgccaaatttatccttaataatttcaacaaatcaacatttgatggcgaatttgat
gctttgtttgccgtgcagtctgtgccaacgcttattcgatattataaaatattcaagagt
cttgatcccaaaattagaataggagccgtgtttacatacgcatctaacagcagtcaggac
gatgcccttacaggtatgaatactggtagctatgtaagtgaaagcacgagcgaagcagat
gagttacaggctattatggatgactataatgatatgttcggtacaagtttcactacagaa
aacttccgtgcatattatgatgatatcaatcttcgtatgaagaaaaagaaaaaagacatg
aagccacttgacctttgtctggtagtcggcatgttcctgacgggctttgacagcaagaaa
ctcaatacactctatgtggataagaatatggactatcatggattattacaagcattcagt
cgtacaaaccgtgtgttgaatgaaaagaaacgttttggcaaaattgtttgcttccgcgat
ttgaaaagcaatgtggatgcttctatcaagcttttcagtaacagcaataatcttgaagat
attgtccgtccgccttttaatgaagtcaagaagaattatcaggaacttacgacaaacttc
ttagaacaatacccaactcccagcagcatagatttgttgcagagcgagaaagataaaaag
ctgtttatccttgcattccgtgatgtcattaagaaacatgcagagattcaggtttacgat
gaatttgaagaagatgctgcagatcttggtatgacagagcagcaatttatggacttccga
agcaaataccttgatatttacgatacatttgctagtggctgtaagccttcagaagggaat
caaacgcctgacgaagatacagggtccacggaaacttcaacagagtcgggtattgatgat
attgatttctgtttagaattgttgcatagtgatattatcaatgtaacttacatacttgaa
ctgattgctgatcttaatccttacagcgcagattataaggaaaaacgtacgtatattatt
gatacgatgattaaagatgctgagttacgtaacaaggcaaaactgattgatggctttata
cagcagaacgtggatgatgaccgggacaactttatggcacgcaaacagaagtttgacggt
acaagcgaccttgaagaacggttgaacgattacatttccacagagcgtaataatgcgatt
gacgctcttgccaaggatgagggattggatgtctctatacttaatcattatctttcagag
tatgactacctacagaaagaacagccggaaatcatacaggaggcattgaaagagaaacat
cttggtctgataaagactcgaaaatctctgacaagggtaatggatagattacgtagtatc
atcagaatatttaactgggactaa

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