Prevotella intermedia: PIN17_0517
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Entry
PIN17_0517 CDS
T02058
Name
(GenBank) ABC transporter transmembrane region
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
pit
Prevotella intermedia
Pathway
pit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PIN17_0517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pit02000
]
PIN17_0517
Transporters [BR:
pit02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PIN17_0517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_30
AAA_29
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFJ07729
LinkDB
All DBs
Position
I:complement(547996..549729)
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AA seq
577 aa
AA seq
DB search
MIKYLQQRFALTEKGAKDLRKGIACSTLMNLALMLPPTYLFFFLMEHIDAKPSTEPHTLW
FYVLVALLLAVLMFFLARFQYDSTYTTVYNESAQRRIGVAEKLRRLPLAFFGERNLSDLT
STVMEDCTMLEQTFSHAVPQLFASALSVVIIGVGMFSYNWHLALALFWVVPLAVTTLLLS
RRQLHKAFVQHYKVKRGVTEQIQEGLECMQEIRSYSGEQAYCRSFDKRLKGYERELVRGE
LVAGVFLNLAGMLLKLGMPTVILVGAWLLQQGEVSVFTYLAYLLASAMVYNPIIEVCNYL
ALLSFLDVRINRMKEIENMPTQEGSAAVQLENYDIEFRNVSFAYETEKQVLHNVSFTARQ
GTVTALVGPSGGGKSTTAKLAARFWDIAEGQILVGGNDISKIDPETLLKHYSIVFQDVLL
FNASIADNIRIGKRNATDEEVRHVARLAQCDDFISRMPQGYDTVIGENGETLSGGERQRI
SIARALLKNAPIILLDEATASLDAENETKIQAGISELVRNKTVIIIAHRMRTVRNADHIV
VLSGGTVSEQGTPDELLARNGEFARMVRLQQERGNSL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatatcttcaacaacggttcgccctcaccgaaaaaggagcgaaagacttgcgg
aaaggcatcgcctgctctacattgatgaacctcgcattgatgctgccgcccacctatttg
ttcttcttcctcatggaacacatcgacgccaagccctccaccgagccgcacacgctgtgg
ttctatgtgcttgtggctttgctcttggcagtgcttatgttcttcttggctcgctttcag
tacgacagcacctacaccaccgtctacaacgagagtgcgcaacgccgcatcggagtggcg
gaaaaactgcgccgactgccccttgctttcttcggcgaacgcaacctttccgacctcacc
tctaccgtgatggaagactgcacgatgctcgagcaaaccttctcgcacgctgttccccag
ctgtttgcgtcggctctgagcgtcgtcatcatcggcgtgggtatgttctcctacaactgg
cacttggctttagccctcttttgggtcgttccgcttgccgtaaccaccctgctgttgtcg
cgccgtcagctgcacaaagccttcgtccagcactataaagtgaagcgtggcgtaaccgaa
cagatacaggaaggactggaatgtatgcaggaaataaggtcgtacagtggcgaacaggca
tactgccgcagcttcgacaagcggctgaagggctacgaacgcgagctggtgcgcggcgaa
ctcgtggcaggagtcttcctcaaccttgctggaatgctgctcaagctcggtatgcccacc
gttatattggtgggagcgtggctgttgcagcagggcgaagtgtcggtattcacctacttg
gcttacctgttggcatcggcaatggtctacaatcccattatcgaagtgtgcaactacctt
gcccttctctctttcctcgacgtgcgtatcaaccgtatgaaggaaatagaaaacatgcct
acacaggagggaagtgcagccgtacaactcgaaaactacgacatcgagttccgcaacgta
agttttgcctacgaaaccgagaagcaagtgctgcacaatgtctcgttcacggcacgccaa
ggcactgttaccgccctcgtgggaccgtcgggtgggggcaaaagcactactgcgaagctc
gccgcacgcttttgggacattgccgaaggacaaattcttgtgggtggaaacgacatctcg
aagattgaccctgaaacgctgctgaaacactattccattgtttttcaggacgttttgctg
ttcaatgcctctattgccgacaatatccgaatcggcaagcgcaacgccaccgacgaggaa
gtgcgccacgttgcccgactggcacagtgcgacgacttcatcagccgaatgccgcaaggc
tacgataccgttatcggcgaaaacggcgaaaccctttcgggtggcgagcggcagcgcatt
tccattgcccgcgccctgctgaagaatgccccaatcatacttctcgacgaagccaccgca
agccttgacgctgagaatgagacgaaaatacaagcgggtatctccgaactggtgcgcaac
aagactgttatcatcatcgcacaccgtatgcgcaccgtccgcaatgccgaccacatcgtg
gtgcttagtggcggtacggtgagcgaacagggaacgcccgacgagctgttggctcgcaac
ggcgagttcgcccgcatggttcgtctgcaacaagaaaggggcaacagtctgtaa
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