Prevotella intermedia: PIN17_A0090
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Entry
PIN17_A0090 CDS
T02058
Name
(GenBank) DNA mismatch repair protein, C-terminal domain protein
KO
K03572
DNA mismatch repair protein MutL
Organism
pit
Prevotella intermedia
Pathway
pit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PIN17_A0090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pit03400
]
PIN17_A0090
DNA repair and recombination proteins [BR:
pit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
PIN17_A0090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AFJ08824
LinkDB
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Position
II:complement(91911..93758)
Genome browser
AA seq
615 aa
AA seq
DB search
MSDIIQLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGAKTINVLIVDAGRTSIQVID
DGKGMSETDARLSFERHATSKIRKADDLFALTTMGFRGEALASIAAVAQIELKTRQEKDD
IGTSLSISGSKFIGQEPCVCPVGSNFKIENLFFNVPARRKFLKSNTTELNNIISAFERIV
LVYPNITFTLHSNGVEIFSLKACSLRQRIVEVFGKRLNQNLLPVEVETTLCRIYGFVGKP
ESAKKKGALQYFFVNDRYMKHPYFNKAVANAFERLVPFGEQVPYFLYFEVPAENIDVNIH
PTKTEIKFENEQAIWQILMAAVKEALGRFNDIPAIDFDTEGKPDIPVFNPSANVSAPTVN
FNPSYNPFKETKSSKSSAASQTQWEELYKGLNEDFSTDTENVLSAPNLPDEQSIFTSNET
GKASVAEERSPAHYQYKGCYIMTAVKSGLMIIDQHRAHVRILYEQYLKQLKEHTAHTQKM
LFPEMVNLPTSNEAALQKVLSEMQTMGFELSDMGGGSYAVNGIPAGIEGLNISALVGDMV
ASTLEDGSSVNEEIDQALALSLARNAAIPYGQVLGNEEMENLVNELFACNNVNYTPTGKT
ILTILKQLDIEKMLE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatataatacaacttttaccagacagtgtggcaaaccaaattgctgcaggagag
gttatacagcgtccagcttccgtagtaaaagagttggtagagaacgctgttgatgctggt
gcaaagacaataaacgttctgatagtcgacgctgggcgtacgtcaatacaagttattgac
gatgggaaaggtatgtcggaaaccgatgcgcgtctttccttcgaacgccacgctacatct
aaaatacggaaagccgacgacctttttgctttaactacaatggggtttcgtggcgaagca
ttagcttctattgctgcggtagcccaaatagaactgaaaacacgccaagaaaaagacgat
ataggtacttcgctctctatttctggcagcaagttcattgggcaagaaccttgcgtttgt
cccgtaggtagcaacttcaaaatagaaaatctcttctttaacgtgcctgcacgacgcaag
ttccttaagtcgaacacaacagaactgaacaatatcatctctgctttcgaacgcatagtg
ctggtgtatcccaacattacgtttacgctacactctaacggagttgaaatattttcgttg
aaagcttgtagcttacgccaacgaatagttgaagtttttggcaagcgactcaatcaaaac
ctacttccagtagaagtagaaactacactttgtcgcatttatggttttgttggcaagccc
gaatcagcaaagaagaaaggtgcattgcaatatttctttgtgaacgaccgctatatgaaa
cacccctacttcaacaaagctgtagccaatgctttcgagcgtttggtgccttttggcgaa
caggtaccttacttcctgtattttgaagtgcccgcagagaatatagatgtaaatatccat
cccaccaaaacagagataaaattcgagaacgaacaagctatttggcaaattcttatggct
gcggtaaaagaagcattgggcagattcaacgatataccagctattgatttcgatacagaa
ggtaagcctgatattcctgttttcaatccttcagcaaatgtaagtgcacctaccgtaaac
ttcaatccaagttacaacccattcaaagaaaccaagagtagcaagtcttctgctgcatcg
caaacacaatgggaagaactttataaggggttaaatgaagacttttcaacagatacagaa
aatgttttatctgctccaaacctacctgacgagcaatcgatcttcacttccaacgaaact
ggtaaagcgagtgttgccgaagagcgttcgcccgctcattatcaatataaaggttgctac
attatgactgctgtaaagtcgggattaatgataatcgaccaacatcgcgcgcacgtacgt
atattatacgaacagtatctgaagcagctgaaagaacatactgcccacacacagaagatg
ctttttccagaaatggtaaacctgcctacaagtaacgaagctgcattacaaaaggtactt
tcagagatgcagacaatggggtttgaactgagcgatatgggcggtggaagctatgctgtg
aatggcattcctgctggcattgagggcttaaacatatcagcccttgttggcgatatggta
gcatcaacgcttgaagatggcagttctgtgaacgaagaaatagaccaagcgctagcttta
agccttgcacgaaatgctgccataccgtatggacaggtcttaggaaacgaggaaatggag
aatttggtgaacgagctgtttgcttgtaataatgtaaactacactccaactggcaagacg
atattgacaatattaaagcaactcgacattgaaaaaatgctggaataa
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