Prevotella intermedia: PIN17_A0096
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Entry
PIN17_A0096 CDS
T02058
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pit
Prevotella intermedia
Pathway
pit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PIN17_A0096 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pit03019
]
PIN17_A0096 (recQ)
03400 DNA repair and recombination proteins [BR:
pit03400
]
PIN17_A0096 (recQ)
Enzymes [BR:
pit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PIN17_A0096 (recQ)
Messenger RNA biogenesis [BR:
pit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PIN17_A0096 (recQ)
DNA repair and recombination proteins [BR:
pit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PIN17_A0096 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AFJ09244
LinkDB
All DBs
Position
II:complement(101316..103499)
Genome browser
AA seq
727 aa
AA seq
DB search
MAKEVNLTEKLKHFFGFDKFKGAQETIIRNVLEGNDTFVLMPTGGGKSLCYQLPSLIMEG
TAIVISPLIALMKNQVDVINGISEEDGVAHYLNSSLKKTEIDNVKADIQSGKTKLLYVAP
ESLNKEDSIEFFKTVKVSFYAIDEAHCISEWGHDFRPEYRKIRQAVDQIGKAPIIALTAT
ATDKVRTDIVKSLGIEDCAEFKSSFNRPNLYYEVRPKKNEEDTNRQIIKFIKQNLGKSGI
IYCLSRKKVEELAAVLQANEIKAEPYHAGLDSETRSKTQDDFLMENIDVIVATIAFGMGI
DKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGKCIVFYSKNDLKKLENFMEGKPVAEQ
DIGRQLLQETETYAESSVCRRKLLLHYFGEEYPKDNCGMCDNCLHPKEKIEAQQPLSIVL
QAVKALKENFRQEYVIDFVKGRGTDDIRDHKHNLLEEFGLGEKEDPKVWNPVIRQAMLDG
FLKKDVENYGLLKLTAAGKRFLKNPQSFMIVMDKEFKTDEIDESMVGGTSVADPELYAML
KDLRKHLARKLGIPAYVIFQDPSLDQMAMMYPITEQELQNIQGVGVGKAKRYGEEFCKLI
KQYCKEKNIERPEELRVRTVAKKSMQKVKIIQGIDRKLPLDDIAVAEGLGFDELLSKIEE
IVYSGTKINIDYFLKDIYDEDKIDDIYDYFMNSHTDSINEALKELDEDYTEEEIRLVRIK
FISEMAN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaagtcaatctcacagaaaagctaaagcactttttcggctttgataagttc
aagggcgcacaagagactattatccgcaacgtgttagagggcaacgacaccttcgtgttg
atgcctacgggtggcggtaagagcctttgctaccaattgccttcgctcataatggaaggc
acggctatcgttatttcccctttgatagcattgatgaaaaatcaagtagatgtcattaat
ggtatcagcgaggaagatggcgtggcgcattatctgaactcttcgttgaagaaaacagag
attgacaacgttaaagccgatattcaaagcggtaagacaaagttgctttatgttgctccg
gaatcgctaaacaaggaagacagcatagagttcttcaagacagtgaaggtcagtttctat
gccatagacgaggcacactgtatctcagagtggggacacgacttccgaccagagtaccgt
aagatacgacaagccgtagaccagattggcaaagctccaataatagcccttactgccaca
gctaccgacaaggtgcgcacagatattgtgaagagtttgggcatcgaagactgcgccgaa
ttcaagagttcgttcaaccggcctaacctttactacgaggtacgacccaagaagaacgag
gaagataccaatcggcagattatcaaattcatcaagcagaatctcggcaagagtggtatc
atctactgtctttcacgcaaaaaggtggaagaactggctgctgtgctgcaagccaacgaa
ataaaggcagaaccgtatcacgctggtctcgattcggaaacgcgctcaaagacgcaagac
gacttcctgatggagaacatcgacgtcattgttgcaaccatagccttcggtatgggcatc
gacaaaccagatgttcgcttcgttatccactacgatattccaaagagtctggaaggctat
taccaagagacagggcgtgctggacgcgacggagaagaaggcaaatgtattgttttctac
tcgaaaaacgacttaaagaagctcgaaaactttatggaaggcaagcccgttgccgagcaa
gacataggcagacagctgctgcaagagaccgaaacatacgccgaatcgtcggtttgccgc
cgcaaattgctgctccactacttcggcgaagaatatccgaaagacaattgcggtatgtgc
gacaactgtttgcaccctaaagaaaagatagaagcccagcaaccattgtccatcgtattg
caagcggtgaaggcattgaaggagaatttccgccaagaatatgttatcgactttgtcaaa
ggtcgtggtactgacgacataagagaccacaagcacaaccttctcgaagagttcggactc
ggcgaaaaagaagacccgaaggtgtggaaccctgtcattcgacaagctatgttagacggt
tttctgaagaaagacgtagagaactacggcttgctgaagctcacggcggcaggcaaacgc
ttcttaaaaaacccacaatcgtttatgattgtaatggacaaagagttcaaaaccgacgaa
atagacgaaagtatggtaggcggaacaagcgttgctgaccctgaactctacgcaatgctg
aaggacctgcgcaagcatttggcacgcaaactgggcattccagcctacgttatcttccaa
gacccatcgttagaccaaatggctatgatgtatcccattaccgaacaagagctgcaaaac
atacagggtgtgggcgtgggcaaggcaaaacgctacggagaagagttctgcaaactcatt
aaacagtattgcaaggaaaagaacatcgagcgtccagaagaactgcgcgtacgcaccgtg
gcaaagaaatcgatgcagaaagtgaagataattcaaggtatcgaccgcaaactgccgttg
gacgacattgctgttgccgaaggtctcggcttcgacgagctactttcaaagatagaagaa
atcgtgtacagtggcacaaaaatcaacatcgactacttcttgaaggatatttacgatgaa
gataagatagacgacatctacgattactttatgaacagccataccgacagcatcaacgaa
gccctcaaggaacttgacgaggactacaccgaagaagaaatccgtttggttcgcataaag
tttatatccgaaatggcaaactaa
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integrated database retrieval system
