Prevotella intermedia: PIN17_A0435
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Entry
PIN17_A0435 CDS
T02058
Name
(GenBank) D-ala D-ala ligase N-terminal domain protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pit
Prevotella intermedia
Pathway
pit00470
D-Amino acid metabolism
pit00550
Peptidoglycan biosynthesis
pit01100
Metabolic pathways
pit01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PIN17_A0435
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PIN17_A0435
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PIN17_A0435
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pit01011
]
PIN17_A0435
Enzymes [BR:
pit01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PIN17_A0435
Peptidoglycan biosynthesis and degradation proteins [BR:
pit01011
]
Precursor biosynthesis
Amino acid ligase
PIN17_A0435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AFJ08634
LinkDB
All DBs
Position
II:complement(430638..431633)
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AA seq
331 aa
AA seq
DB search
MKDMKRTIAIVCGGDSSEHDVSLRSAQGLYSFFDKERYNIYIVDVKGTDWHVNLDNGHVA
AINKNDFSFNNGVQTVFFDYAYITIHGRPGENGIMQGYFELINIPYSTCDVLMSALTFDK
FVLNRYLKSYGIRVPESILLRIGDEYDEKEIEAKIGMPCFIKPATDGSSFGVSKVKNADQ
IAPALRKAFMESSEVMVEGFLDGIEITQGIYKTKEKSVPFPITEVVTSNEFFDYNAKYNG
EVDEITPARISNELAERVTEITSRIYDILHANGIIRIDYIITKDNEGNDVINMLEVNTTP
GMTTTSFIPQQVRAAGLDIKDVLSDIVENQF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatgaaacgtacaatagccatcgtctgtggtggcgattcttcagagcacgat
gtctctctccgttctgcacaggggctgtattccttcttcgacaaagagcgttacaacatc
tatatagtagatgtaaagggtacagactggcacgtaaaccttgacaatggacacgttgca
gctatcaataagaacgatttctcgttcaataacggtgtccagaccgtctttttcgactat
gcgtacattacaatacacgggcgtccgggcgagaatggtataatgcaaggatattttgag
ttaataaacattccttattctacctgcgacgtgctgatgtcggcactcactttcgataag
tttgtgctgaaccgatatttgaaatcatacggtattcgcgtgccagagagtatcttgctg
cgcatcggagacgagtacgacgaaaaggaaatcgaagcgaagataggtatgccttgcttc
attaagccagcaaccgacggcagcagctttggcgtttcaaaggtaaagaatgccgaccag
atagctccagccctccgcaaggcgtttatggaaagttcggaagttatggttgaaggtttc
ctcgacggtatagaaataacgcaaggtatctataaaacgaaggaaaaatcggttccgttc
cccatcacagaagtggttacgagtaacgagttcttcgattacaacgccaaatacaatggc
gaagtagacgagataacgcctgcccgcatcagcaacgagttagctgaaagggtaacagaa
ataacctctcgtatctacgatattctgcacgcgaatggcattatccgcatcgattacatc
ataacgaaggacaacgagggcaacgatgttatcaatatgctcgaagtaaacaccacgccg
ggaatgacaaccacaagtttcattccgcagcaagtgcgtgcagcaggtcttgatattaag
gacgtgctgagcgatatagtggaaaatcaattctaa
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