Prevotella intermedia: PIN17_A0458
Help
Entry
PIN17_A0458 CDS
T02058
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pit
Prevotella intermedia
Pathway
pit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PIN17_A0458 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pit03019
]
PIN17_A0458 (pnp)
03016 Transfer RNA biogenesis [BR:
pit03016
]
PIN17_A0458 (pnp)
Enzymes [BR:
pit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PIN17_A0458 (pnp)
Messenger RNA biogenesis [BR:
pit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PIN17_A0458 (pnp)
Transfer RNA biogenesis [BR:
pit03016
]
Prokaryotic type
tRNA degradation factors
PIN17_A0458 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
RNase_PH_C
PNPase
KH-I_KHDC4-BBP
ORF6C
RNase_II_C_S1
DAPDH_C
Motif
Other DBs
NCBI-ProteinID:
AFJ09565
LinkDB
All DBs
Position
II:454832..456541
Genome browser
AA seq
569 aa
AA seq
DB search
MEEADMDIMVGATKDNIMMVEGEMDEVSEQDLINALKAAHDAIKPMCEIQEELAKELGTD
VKREYCDEVNDEELREQVKKETYDACYAQAQSGDNDKKHREEVYDKIKSDFIERYDAAHT
DLSEDDLEEKHAQIERYYADVQRDSMRRSVLDTGKRMDGRACDEIRPIWCEVDPLPMPHG
SAYFQRGETLALATCTLGTKLDEKMVDNVLDKSYQRFLLHYNFPPFCTGEAKAQRGVGRR
EIGHGHLAWRGLKGMIPEDFPYTVRLVSQVLESNGSSSMATVCSGTLALMDAGVPIKKPV
SGIAMGLIKNPGEEKYAVLSDILGDEDHLGDMDFKTTGTRDGITATQMDIKCDGLSFEIL
EKALMQAKQAREYILGKIEETISEPREEMKPQVPRIEALEIPKEFIGAIIGPGGKIIQQM
QEESGATITIDEVDGVGKIQVSAPNKNAINAAMSKIKSIVAVPEIGEVYEGTVRSIMPYG
CFVEIMPGKDGLLHISEIDWKRLETVEEAGIKEGDKLQVKLLDIDPKTGKYKLSRRCLLE
KPEGYVEPQRRPRADRGERRPRRDDNHRS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagccgatatggatattatggttggtgccaccaaggacaacattatgatggtg
gagggtgaaatggacgaggtctcagaacaagaccttatcaatgccctcaaggcagcgcac
gacgctatcaagcctatgtgcgaaatacaggaagaacttgcaaaggaactcggcacagac
gttaagcgcgaatattgcgacgaagtgaatgacgaagagctccgcgagcaggtgaagaaa
gaaacgtatgatgcttgctatgcacaggcacagagcggcgacaacgacaagaagcaccgc
gaagaagtttacgacaagattaagtcggacttcatcgaacgctacgatgcagcacatacc
gacctttcggaagacgacctcgaggaaaaacacgcacagattgaacgttactacgctgat
gtgcagcgcgactcaatgcgccgcagcgttcttgatacaggtaagcgcatggacggccgt
gcatgcgatgaaattcgcccaatatggtgcgaagtagacccactgcctatgcctcacgga
agcgcatacttccaacgtggcgaaacattggcactcgctacttgtacattgggtacgaag
ttggacgagaagatggtagacaacgtgctcgacaagagctaccaacgcttcctgctccac
tacaacttccctcctttctgtacaggcgaagcaaaggcgcagcgtggtgttggccgtcgc
gaaattggtcacggacacttggcttggcgcggtttgaagggcatgataccagaagatttc
ccttacactgtgcgtcttgtaagtcaggtattggagtctaacggctcttcttctatggct
accgtatgttcgggaacacttgctttgatggacgctggcgtgcctatcaagaagcctgta
tcgggtattgcaatgggcttgattaagaatccaggcgaagaaaagtatgccgtactgagc
gatattcttggcgacgaggaccacttgggcgatatggacttcaagacaactggtactcgc
gacggtattacagcgacacagatggatattaagtgcgacggactttcgtttgaaatcctc
gaaaaggcactcatgcaggcaaaacaagctcgcgaatatattctcggcaagatagaagaa
accatttctgaaccacgcgaggagatgaaaccacaggttccacgtattgaagcactcgaa
attccaaaagaatttattggtgctatcatcggtcctggcggtaagattatccagcagatg
caggaagaaagcggtgctaccatcaccatagacgaggttgatggcgttggcaaaatccaa
gtttctgcacctaacaagaatgctatcaacgcagcaatgagcaagattaagtcgattgtt
gctgtaccagaaatcggtgaagtttacgaaggaacagttcgttctattatgccttacggt
tgctttgttgagattatgcctggcaaggacggcttgctccatatttcagaaatcgactgg
aagcgtctcgaaactgttgaagaagcaggcattaaggaaggcgacaaacttcaagtcaag
ctcctcgacatcgaccctaagactggtaagtacaagctttcacgccgttgcttactcgaa
aagcctgaaggttatgtagagccacagcgtcgtccacgtgccgacagaggcgaacgccgc
ccacgtcgcgacgataaccaccgttcataa
DBGET
integrated database retrieval system
