KEGG   Prevotella intermedia: PIN17_A0530
Entry
PIN17_A0530       CDS       T02058                                 
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pit  Prevotella intermedia
Pathway
pit03030  DNA replication
pit03410  Base excision repair
pit03420  Nucleotide excision repair
pit03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PIN17_A0530 (polA)
   03410 Base excision repair
    PIN17_A0530 (polA)
   03420 Nucleotide excision repair
    PIN17_A0530 (polA)
   03440 Homologous recombination
    PIN17_A0530 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pit03032]
    PIN17_A0530 (polA)
   03400 DNA repair and recombination proteins [BR:pit03400]
    PIN17_A0530 (polA)
Enzymes [BR:pit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PIN17_A0530 (polA)
DNA replication proteins [BR:pit03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PIN17_A0530 (polA)
DNA repair and recombination proteins [BR:pit03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PIN17_A0530 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PIN17_A0530 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_2 Polysacc_deac_2 DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AFJ08547
LinkDB
Position
II:535789..538551
AA seq 920 aa
MDKLFLIDAYALIYRSYYALIRNPRINSKGVNTSAIMGFCNTLNEVLTKENPTHIAVAFD
HGLTFRHEAFPEYKAQREETPEDIKLSVPYIKQILEAMRIPILQVDGFEADDIIGTVATL
AGSKGITTFMLTPDKDYGQLIRENVYMYRPRHGGGYDVVGMNEVEDRYGIPTPAQVIDLL
ALMGDSADNFPGCPGVGEKTAAKLINQFGSIDNMLKHTDQIKGKLREKVETAIDDIKMSK
FLATIRTDVPFDLEWDELKIEQPDEDKLREIFTELEFKTLLNKFIKGGQKAQKTDNLQLN
LFAENAPEDAGDAKKTPSCSLSAVPHNYKLIENEEEARNICDYFFTKEFLCLDTETTSAD
AIDAELVGLSFSVAEKEAFYVAVPANREEALKIVNIFKPLYEDEKILKIGQNIKYDYEVL
HKYGVTLKGKLFDTMIAHYLIQPELRHNMDYMAETLLNYKTIPIESLIGAKGKHQKNMRD
LQPSEIYEYACEDADITLQLKHVLEPKLKEVEAEDLFWNIEMPLVPVLADMELHGVRLDT
AALEETSRIFTERMNQYEQEIYEFAGESFNISSPKQVGEMLFGKLQIMEKPKKTKTGQYV
TSEEVLVSLENKHPIVHKILEYRGIKKLLSTYIDALPKLIKPETGHIHTSFNQALTATGR
LSSSDPNLQNIPVRTDDGKEIRKCFIPEPGCEFFSADYSQIELRIMAHLSKDENMMEAFR
KGFDIHRATAAKIWHEDMENVTDTQRKKAKQANFGIIYGITTYGLAQRMDIPNGEAKELI
DGYFNTFPKVKAYMERAKEEARQKGYAETIFHRRRYLADINSRNATVRGFAERNAINAPI
QGSEADIIKVAMVRIWQRFKRENIRSKMILQVHDELNFSVFPDEKEQVERIVIEEMQNAY
PLNVPLIADAGWGENWLEAH
NT seq 2763 nt   +upstreamnt  +downstreamnt
atggacaaactgtttctcatcgacgcttacgcacttatctatcggtcgtattatgccctc
atcagaaatccgcgtatcaactcaaaaggagtgaatacatcggctattatgggtttctgc
aacacgctgaacgaagtgctgacaaaggaaaatcccacacacattgccgtggctttcgac
catggtctcaccttccgacacgaggcattccccgagtataaggcacaaagagaggaaaca
ccagaagacataaagctgtctgttccctacataaagcaaattctcgaagctatgcgcata
cctatcctgcaagtcgatggcttcgaggcggacgacattatcggtacggtggcaacgctg
gcaggcagcaagggcattaccacctttatgcttacacccgacaaggactacggtcagctt
atccgagagaacgtctacatgtatcgtccaaggcacggcggaggctacgatgtggtaggt
atgaacgaggtagaagacagatacggtatccctaccccagcccaagtaatcgaccttttg
gcacttatgggcgactctgccgacaactttccgggttgtcctggtgtgggcgaaaagacc
gctgcaaagcttatcaaccagtttgggtctatcgacaatatgctcaaacataccgaccag
ataaaaggaaagctaagagagaaagtggaaactgccatcgacgacatcaagatgtcgaag
ttcttggcaaccattcgcactgatgttccattcgatttggaatgggacgaactgaagata
gaacagcccgacgaagacaaactacgcgaaatcttcaccgaattagagttcaaaacactt
cttaacaaatttattaaaggcggtcaaaaagcgcaaaaaaccgataatttgcagctcaat
ttatttgcagaaaatgcgcccgaagatgcaggcgacgcaaaaaaaaccccttcctgcagc
ctttcagcagtgccacacaattacaaactaattgagaatgaggaagaagcacggaatatt
tgtgattatttctttacaaaagagtttctctgtttagacacagaaactacgtcggcggac
gccatcgatgcagaattggtgggtttaagcttctcggtagccgaaaaagaggcattttat
gtagccgttcccgctaatcgtgaagaagccttaaagatagtaaatatatttaaaccgcta
tacgaagacgagaaaattctgaagattgggcagaacattaaatacgattacgaagttcta
cacaaatatggcgtaacgttaaagggcaagttgttcgacacgatgattgcacactacctt
atccaacccgagcttcggcacaatatggactacatggcggaaacgcttttgaactataaa
accattccaatagaaagccttatcggtgccaaagggaagcatcagaaaaacatgcgcgac
ctgcaaccgagcgaaatctacgagtacgcttgcgaagatgccgacattacgctgcaacta
aagcacgtgctcgaaccgaaactgaaggaagtggaagccgaagacttgttctggaacata
gaaatgccgctcgtgcccgtgctcgccgatatggaactgcacggcgtacgcttagatacg
gctgccttagaagaaacttcgcgcatctttaccgaacgcatgaaccaatacgaacaggag
atatacgaattcgcaggcgaaagtttcaacatctcaagtcccaagcaggtgggcgaaatg
ctgttcggaaagttgcagataatggagaaaccgaaaaagacaaagacaggacagtatgtt
acaagcgaggaagtattagtgagtttggagaacaaacaccccatcgtacataagatattg
gaatacagaggcattaagaagctactcagcacctatatcgacgccctgccaaaacttatc
aaacccgaaacaggacatatacacacgtcgttcaatcaggcacttacggcaacgggcaga
ctgtcgtcgagcgacccaaacttgcagaatatacccgtcagaacagacgacggcaaggaa
atccgcaagtgtttcatacccgaacccggctgcgagttcttctctgccgactatagtcag
atagaacttcgtatcatggcgcacctctcgaaagacgaaaatatgatggaagccttccgc
aaagggttcgacattcaccgtgctacggctgccaaaatatggcacgaagatatggaaaac
gtaaccgacacacagcgaaagaaagccaaacaagccaattttggcatcatctacggcatt
actacttacggtttggcacagcgaatggacattccgaacggcgaagcaaaagagctgata
gacggctacttcaacactttcccgaaggtaaaagcttatatggagcgtgcgaaagaagaa
gcgaggcagaagggttacgccgaaaccatcttccaccgtcgccgttaccttgccgacatc
aatagccgaaacgcaactgtaaggggttttgccgaacgcaatgccatcaacgcccctata
caaggttcggaagccgacatcataaaggtggctatggtgcgcatctggcaacgtttcaag
cgcgaaaacatacgctcgaaaatgattttacaggtacacgacgaactcaacttctcggta
tttcccgacgaaaaagaacaagtggagcgcatcgtgatagaggaaatgcagaatgcctat
ccgctcaacgtacccttgatagccgatgctggttggggcgaaaattggctcgaagcgcac
taa

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