Prevotella intermedia: PIN17_A0580
Help
Entry
PIN17_A0580 CDS
T02058
Name
(GenBank) GH3 auxin-responsive promoter
Organism
pit
Prevotella intermedia
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-ProteinID:
AFJ08197
LinkDB
All DBs
Position
II:complement(593210..594733)
Genome browser
AA seq
507 aa
AA seq
DB search
MNLTSIVNKLYFQPRRRDLERYINKGEAIQREILQYLVKRGKDTEYGRNHLFSTIKSYED
FAQNIPVNTYEELKDDIDRMRHGEKDILWPGQVKWYAKSSGTTNDKSKFIPITHEGLQTL
HYQGGKDVVAYYLSNNPDSRLFSGKGLILGGSHSPNYNLPNSLVGDLSAILIENINPLAN
LVRVPSKEVALLSDFEVKRDRIARETLSQNVTNISGVPSWMLSVLVRVMELTGKQHLQEV
WPNLEVFFHGGIAFTPYREQYEQLITKSDMKYMETYNASEGFFGIQDDPNDESMSLMLDY
GVFYEFLPMDEFENEKPNIVPLEGVEVGRNYAMLISTACGLWRYEIGDTVRFTSIRPYKF
VITGRTKYFINAFGEELIMDNAEKGLETACKATGAQISEYTAAPIFMDANAKCRHQWLIE
FTKEPDDIHDFERILDSKLQEINSDYEAKRFHNITLQQLEVVVARKDLFNDWLKSKGKLG
GQHKVPRLSNNRKNIEEMLSMNKEKEE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttacaagcatagtaaataagttgtacttccagcctcgtcgtcgtgatttggaa
cgttatatcaacaagggcgaagctatccaacgcgaaatattacaatacttggtaaagcgc
ggaaaagatacggaatatggaagaaaccatttgttttctactatcaagtcgtacgaagac
tttgcgcaaaacatacctgtaaacacctacgaagaactgaaagacgacatcgaccgtatg
cgacacggcgagaaagacatattgtggcctggacaagtgaagtggtatgcaaagtcatcg
ggcacgacaaacgataagagtaagttcattccaattacgcacgagggcttgcagaccctg
cattatcaaggtggcaaagacgttgtagcttactacttgagcaataatcctgacagcagg
cttttcagcggtaagggtcttatactcggcggaagccattcgccaaactataacctgccc
aattcgcttgttggagatttgagtgctattctcatagagaacatcaatccgttggcaaac
cttgtgcgtgtgccttcaaaagaggtggcactgctgagcgacttcgaggtaaagcgcgac
cgtatcgcccgcgaaacgctctcgcagaacgttaccaacatttcgggagtgccgtcgtgg
atgctgtcggtgttggttcgagtgatggaactgacaggaaagcaacatctgcaagaggtt
tggccaaacttggaagtattcttccacggtggtatagcgtttacgccgtatcgtgagcaa
tacgagcagctcatcacgaagtcggatatgaagtatatggaaacctacaatgcttcggaa
ggattcttcggtattcaagacgacccgaacgatgaaagtatgtcgttgatgctcgattac
ggtgtgttctacgagttcttacctatggacgagttcgaaaacgagaagccaaacatcgtt
ccgttagaaggcgtagaggtagggcgcaactatgcaatgctcatcagcacagcctgcgga
ctgtggcgatacgaaatcggcgatacggttcggttcacttccatccgtccttacaagttc
gttattacaggtcgcaccaagtatttcatcaatgctttcggcgaagaacttatcatggac
aatgccgaaaaaggcttggaaacagcttgtaaagctactggcgcacagatttcagagtat
acggcagcacccatttttatggacgccaatgccaagtgccgccaccaatggctcatcgaa
tttacgaaagagcccgacgatattcacgattttgaacgcatcttagacagtaaattgcaa
gaaataaactccgattacgaggccaaacgcttccacaatataacattgcagcagctagaa
gtggtggtggcaagaaaggatttgttcaacgattggctgaagtcgaaaggcaaacttggc
ggacaacacaaggtgccacgactgtcgaacaaccgtaaaaacatcgaagagatgttgtcg
atgaataaggaaaaggaagaataa
DBGET
integrated database retrieval system
