Prevotella intermedia: PIN17_A0596
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Entry
PIN17_A0596 CDS
T02058
Name
(GenBank) HTH domain protein
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
pit
Prevotella intermedia
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pit03000
]
PIN17_A0596
Transcription factors [BR:
pit03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PIN17_A0596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
HTH_24
AsnC_trans_reg_3
HTH_11
NirdL-like_HTH
HTH_IclR
MarR_2
PCI
NapD
HTH_20
DIP2311-like_C
HTH_PafC
Myb_DNA-bind_8
MarR
TetR_N
HTH_23
HTH_34
HemN_C
DUF6262
HTH_Tnp_ISL3
DUF6362
Motif
Other DBs
NCBI-ProteinID:
AFJ09391
LinkDB
All DBs
Position
II:complement(612213..612677)
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AA seq
154 aa
AA seq
DB search
MDKIDKLDRKILSILSQNARIPFKDVAAECGVSRAAIHQRVQHLIENGVIIGSGFHVNPK
SLGYTTCTYVGLNLERGSMYRDVVERISTIPEVIECHFTTGSYTMLVKLFAKDNEQLMDL
LNNRIQSIPGVVSTETLISLEQSIKREIPIAEEL
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggataagattgataaattagacagaaagatattgagtatcttgtcgcaaaacgctcgt
atcccgtttaaagatgtagcagcagagtgtggcgtatcgcgcgcagcaatacaccaacgt
gttcaacaccttatcgaaaatggcgtaattataggcagcggcttccacgtaaaccctaaa
agtcttggctataccacgtgtacttacgttgggttgaaccttgaacgtggctcaatgtat
cgcgatgtagtcgagcgtatcagcaccattcctgaagttatagagtgccatttcaccact
ggttcgtacactatgctcgtcaaactcttcgcaaaggacaacgaacaactgatggatttg
ctcaataacaggattcaaagcattcctggtgtagtatctaccgaaacgcttatctcgctc
gaacaaagtatcaaacgcgaaatcccaatcgccgaggaactataa
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