Prevotella intermedia: PIN17_A0764
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Entry
PIN17_A0764 CDS
T02058
Name
(GenBank) SNF2 family N-terminal domain protein
Organism
pit
Prevotella intermedia
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
Eco57I
SNF2-rel_dom
ResIII
HEPN_AbiA_CTD
Motif
Other DBs
NCBI-ProteinID:
AFJ08879
LinkDB
All DBs
Position
II:complement(790060..795525)
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AA seq
1821 aa
AA seq
DB search
MASYNKKEHLRANIEAIKTVFALHREQRTATEEEMEVLRAYTGFGALKCILSPANTMEDI
ARWNKSELELFPLVMELHRTIRDNTISESQYKSYMQSLKNSVMTAFYTPAPVVREIAASL
REAGIVPQRILDPSAGMGEFIRSFDGIAAEGHTTFGFEKDILTGQMLSALHPEDKIRIRG
FEEIESKLGGYFDVVSSNIPFGDVAVFDPVFSKTAEPARKIARMSLHNYFFVKGVDMLRE
GGVLAFITSQGVMNAPTNEPVREWLMNHTRLVSAVRLPNNLFSENAGTEVGSDLIVLQKQ
SGKKELTEEEQRFIKSEKRPSGVLFNTYLRSMSQIVHTEWKQDTDPYGKPAILFHHEGGA
EGIATDMGKILRADLAKRLDMALYQKHISIQEQPKVSVPPEVKQQEATLTPVASTEEQPH
QEVGQPREEQPTEQSRSSVAPQVQLLDLFGNVIPEEKPKRKAAAKPKSVETSQSNETAQR
PKDTGELWWQQDKEKGMQQRPYEGVWHEHLREGSLLTSDFQVGMLVRDMEDNRMFQPIDL
PSQERQKMLLYIDLRDAYHALYDYEAERKVANESLRQNLNELYDRFVRLYGHLNDRKNHE
QILMDAGGREILFLERKVDKETLKADIFHQPVSFSLHEVTEVSNAQEALSASLNKFGSVD
IDYMLSLLSDISEEEMLSELHGRIYYNPLEGEYEIAEKFISGNVVAASERIGQYLLEHPE
DTRAQASLQALKDAIPEPIPFADLDFNFGERWIPVNLYSDYASHLFDTEVTIRYNSSADE
YSVEARMHNANIWDRFCVRGQHRRYDGIALMKHALLNTTPDITKKIMVGDKEVKIRDTEA
IQMANAKIDEIRNGFTDWLNEQSDEFKKRLEKLYNDTFNCFVRPQYDGSHQTFPDLNLKG
LGIESLYDSQKDAVWMLKLNGGGICDHQVGAGKTLIMCTAAYEMKRLGLANKPMILALKA
NVQEIAQTFQTAYPNAKLLYPGKNDFTPDKRQRIFHDIKNNNWDCIVLTHDQFGMIPQSD
EIQQKIIQDELDSVEENLEVLRQQGRSISRGMEKGLVKRQMNLEAKLADIKFRIENRKDD
VVDFKTMGIDHLFVDESHTFKNLMFNTRHDRVAGLGNSEGSQRALNMLFAIRTIQERTGK
DLGATFLSGTTISNSLTELYLLFKYLRPQALEAQHIKTFDAWAAIFAKKSVDYEFSVTNE
IVQKERFRYFIKVPELAAFYAQITDYRTAKDIGIDRPEKREIMHNIPPTPEQEEFIAKLV
EFAKTGNAELLGREKLSDREEKAKMLIATDMARKMSLDLRLIDPNKYGDHVDNKASHCAA
KIAEYYHKFEEQKGTQFVFSDLGTYKPGEWNPYSEIKRKLVEDHGIPAQEIRFIQEAKTD
KARKTLIAGMNEGSIRVLFGSTSMLGTGVNAQKRAVAIHHLDTPWRPSDLEQRDGRAVRK
GNEVAKLYADNKVDVIIYAVEKSLDSYKFNLLHNKQLFIEQLKNNRMGSRTIDEGSMDEK
SGMNFSEYVAILSGNTDLLEKAKLEKKIAGLDSERQAFIRSKSSSRSRLDEVVRTVDGNK
ELIARFQSDWDLYQSRVQKDKEGNILNPITLKGVEGSAPKRIAAKLAEINEKACTRGEYF
NIGTLYGFNLVVKTESSSKDLFDLSQNKFFVMGESGMKYSYNNGRIAADPQLACMNFLNA
LEKIPGLIEKFKADTEKIAKDIPVLQEVVNGSWKKEEQLKDLKTELAALDRKIQLSLKPI
EQGESEQEGTEVMQDGEGKAEELERSRPIEPTVAAPSVSTSAAQTDRPLESSGQSISATQ
PSMNGLPPSLAEKVFVVRPKI
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttataacaagaaggagcatctaagggcgaacatagaagccatcaagacggtc
tttgccctgcatcgggaacaacgcacggcaacggaggaggaaatggaggtgttgcgggct
tatacgggcttcggggctttgaagtgtatcctctctcccgccaacacgatggaggacatc
gcccgatggaacaagtcggagttggaacttttccccttggtgatggagctgcatcgcacc
attcgggacaacaccatctccgaatcgcaatacaagagctatatgcagagcctgaagaac
tccgtaatgaccgctttctatactcctgcacccgtagtacgagagattgccgcttcctta
cgggaggcaggcatcgtccctcaacgcatccttgacccttcagcgggaatgggcgagttc
atccgctcttttgacggcattgcagccgaagggcatacgactttcggtttcgagaaagac
atccttacgggacagatgctctccgctctgcatcccgaagacaagatacgcatccgaggc
ttcgaggaaatcgaatccaagctcggaggttatttcgatgtggtcagcagcaacattcct
ttcggagatgtggccgtcttcgaccctgttttcagcaagacggcagaacctgcccgaaag
atcgcccgcatgtccctgcacaattacttcttcgtcaagggggtggatatgctccgtgaa
ggcggtgtgttggcattcatcacctcgcaaggtgttatgaacgccccaacgaacgaaccg
gtacgggagtggctgatgaaccatacccgccttgtttcggcagtccgtctgcccaacaat
ctcttctcggaaaatgcagggacggaagtgggcagtgaccttatcgtcctgcaaaagcag
agtgggaaaaaggaactgaccgaagaagagcagcgtttcatcaagagcgagaaacgcccc
agcggagtactgttcaacacctatctacgaagcatgtcgcaaatcgtgcataccgagtgg
aagcaggacaccgacccttacggcaagcctgctattctgttccatcacgagggcggagca
gaaggcatcgctaccgatatgggaaaaatcctgcgggcggatttagccaaacgcttggat
atggcattgtaccaaaagcatatctccattcaggagcagcccaaagtttccgttcctccc
gaagtcaagcagcaagaagcaacgcttacgcctgtcgcttcgacagaggagcaaccacac
caagaggtggggcaaccgagagaggaacagccgacggagcaatcccgaagcagtgtcgct
ccgcaggtacaactgctcgaccttttcggcaatgttatcccggaggaaaagcccaaacgt
aaagctgccgcaaaaccgaaatctgtcgagacttcacaaagcaatgagacggcacagagg
ccgaaagatacgggagaactatggtggcagcaggacaaggagaaagggatgcagcagcgt
ccctatgagggagtatggcacgaacatctcagagaggggtctttgctgacttcggacttt
caggtaggaatgcttgtccgtgatatggaggacaaccgcatgttccagcccatagacctc
ccgtcccaagaacgacagaaaatgttgctctacatagacctgcgggatgcctaccacgcc
ctctatgattatgaagcggaacgcaaggtggcgaatgaatccctgcgacagaacctcaat
gaactgtacgaccgtttcgtgcggctgtacggacatttgaacgaccgcaagaaccacgag
cagatcctgatggatgccggtggcagggaaatcctcttcttggaacggaaggtggataaa
gaaacgctcaaagccgatattttccatcagcccgtttctttcagcctgcacgaagtgaca
gaggtgagcaatgcccaagaggctctctcagcttcactcaataaattcggatcggtggac
atcgattatatgctctctttgctttctgacatctctgaagaagagatgctctccgaactg
cacggcaggatttactacaatcctttggagggagagtatgaaattgccgagaaattcata
tcgggcaatgtggtcgccgcttcggagcgtatcggacaataccttttggagcatccggaa
gacacaagggcgcaagcctccttgcaggcactgaaagatgccattcccgaaccgatacct
ttcgcagacttggatttcaacttcggggaacgatggattcccgtaaacctttattccgac
tatgcctctcatctcttcgacacggaggtaacgatacgctacaattcaagcgcagacgaa
tactctgtggaggcacggatgcacaatgccaatatatgggacaggttctgtgtacgggga
cagcatcgtcgctacgacggcatcgccctgatgaaacacgccctgctgaatacaacgcct
gacattaccaagaaaatcatggttggcgacaaggaggtcaagatacgggataccgaagcc
atacagatggcaaacgctaaaatcgacgagatacgaaacggcttcaccgattggctgaac
gagcagagcgatgagttcaagaagcggttggagaaactctacaatgacactttcaattgt
tttgtgcgtcctcagtatgatggttcccatcagacattccccgaccttaatctgaaaggc
ttgggcatcgaaagcctgtacgacagtcagaaagatgccgtgtggatgctcaaactcaac
ggaggaggaatctgcgatcatcaggtgggagcgggaaaaacgctcatcatgtgtacggca
gcttatgagatgaagcggctcggcttggcgaacaagccgatgatactcgctctcaaagcc
aacgtgcaggagatagcacagactttccaaacggcttacccgaatgcgaagctactctat
ccgggcaagaacgacttcacccccgacaaacggcaaaggattttccacgacatcaagaac
aacaactgggactgcattgtcctcacgcacgatcagttcggcatgataccacagtcggac
gagatacagcagaaaattattcaggacgagctggacagcgtggaagagaacttggaggtt
ctgcgtcagcagggacgtagtatctcccgtgggatggagaaaggacttgtcaagcgtcag
atgaatttagaagcgaaacttgctgacatcaaattccgcattgagaaccgaaaggacgac
gtggtagatttcaagaccatgggtatagaccatcttttcgtggacgagtcgcatacgttc
aagaacctgatgttcaatactcgccacgaccgtgtggcagggcttggcaacagtgagggg
agccaaagagccttgaatatgctctttgccatccgcacaatacaggagcggacgggaaaa
gacttgggagccactttcctttcgggtacgaccatatcgaactccctcacggagttgtat
ctgctgttcaagtacctgcgtccccaagctctcgaagcccagcatatcaagacctttgat
gcgtgggcagccatctttgccaagaagtcggtggactatgagttctccgttaccaatgag
attgtacagaaagagcgtttccgctattttatcaaagtgccggagttggcagcgttctac
gctcaaatcaccgattaccggacggcaaaagacatcggcatcgaccgaccggagaaacgg
gagattatgcacaacataccgcctacgcccgaacaggaagagttcatcgccaagttggtg
gagtttgccaagacgggcaatgcagaattattaggacgagagaaactctccgatagagag
gagaaagccaagatgcttatcgcaacggacatggctcgaaagatgagcttagatttgagg
cttattgatcctaacaagtacggagatcatgtggacaacaaagcctcccactgtgctgcc
aagattgcggaatactatcacaagtttgaggagcagaaaggaacgcaatttgtattcagt
gatctcggtacgtataagccgggcgaatggaatccctattccgaaatcaagcgcaagttg
gtggaagaccacggcatacccgctcaggagatacgctttattcaggaagccaagactgac
aaggcaagaaagacgctcatcgcaggcatgaatgaaggttcaatccgagtattgttcggc
tctacttcaatgctcggcacgggcgtaaacgcccaaaagcgtgctgtcgctatccatcat
ttggacacaccgtggcgtccttccgacttggagcaaagggatggacgagccgtgcgtaag
ggaaatgaggtagccaaactctatgcagacaataaggtggatgttatcatctatgcggtg
gaaaaatcgcttgacagttataaattcaatttgctgcacaacaagcaactttttatcgaa
cagcttaaaaacaaccggatgggcagtcgtaccatcgacgagggaagtatggacgagaaa
tcgggaatgaatttttccgaatacgtcgccatcctctccgggaataccgatttattggag
aaggcaaagttggaaaagaagattgccggtttggacagcgaacggcaggcgttcattcgc
agtaagtcatcctcccgaagtcgattggacgaagtcgtgcggacggtggacggcaacaag
gagttgattgcccgtttccaaagtgactgggacttgtaccaaagccgtgtgcagaaagac
aaggagggaaacatcctcaatccgataacgctcaaaggggtggaaggaagcgccccgaaa
cgcatcgctgccaaactcgcggaaatcaacgagaaagcctgcacacggggagagtatttc
aatatcggaacactctacggatttaatcttgtggtcaagacggaatcctcctctaaagac
cttttcgacctttcgcagaacaagttcttcgtgatgggagaaagcggaatgaagtacagc
tacaacaatggtaggattgcggcagacccgcaactcgcctgcatgaatttcctgaacgcc
ttggagaagatacccggcttgattgagaagtttaaggcggacacggaaaagatagccaag
gatattccggttttgcaggaggtcgtgaacggatcttggaagaaggaagagcagctcaaa
gacctcaaaacggaactcgctgcccttgaccgcaagatacagctctctctaaaacccatc
gagcagggagagagtgagcaagaaggaacggaggtgatgcaggacggcgaaggaaaggcg
gaagaattggaacggtcacgtccgattgagccgactgtcgccgccccctccgtcagcacc
tctgcggctcaaaccgacagaccgttggaaagcagcgggcagagtatctccgctacacag
ccctctatgaacggactgccgccgtctctggcagaaaaggtgttcgttgtcagaccgaaa
atataa
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