Prevotella intermedia: PIN17_A0886
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Entry
PIN17_A0886 CDS
T02058
Name
(GenBank) tape measure domain protein
Organism
pit
Prevotella intermedia
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMP_3
SHOCT
GvpG
HAP
Motif
Other DBs
NCBI-ProteinID:
AFJ08948
LinkDB
All DBs
Position
II:906465..911102
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AA seq
1545 aa
AA seq
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MANAQPVKIELLMVDKLSPNMDKSQRKVKELQQNVAAANRELENTEQISNRLTRSVGKLA
AAFTIKEFVSEVAKVRGQFQQLEVAFTTMLQSEEKANALMMQLVRTAATTPFGLEDVAQG
AKQLLAYGFEAERVNETLIRLGDIAAGLSVPLNDLVYLYGTTMAQGRLYTQDLNQFTNRG
LPMISELAKQFGVAEDKVRELVEAGKVGFPEVQQVIESLTNEGGKFGGLMAEQSKTIVGQ
IANIEDSISIAFNKLGQQSEGVINTTLSGISYVVEHYERFGRILLAMVATYGTYRAAVML
TAAAKGWATAAEALHYNWLVLVERAQKALNATMLANPYVLVATMLAGVVATMVSAKTETE
RLQDADEAYEAQKQKVIEAEEAHKRRLEELCQIAGDEALSTDTRREALNKLEQKYPNIFA
KYDTEYAKLKNIKKIKEEIALLDGQKSLANPKNEVKTINDRIKTLEKKKSTEYWEESDRN
GSMTKRGGLTKGEEAELKTLYGKRNNLTGQIRKSQVNAYFEKLTGVSNDTLEKEIKRREN
LLAAMKVNGKKYGKIIQGSKSLTGIYSNDELQYQLNKLVAERNRRNAKRDNSAAWGTQAK
KNYEQALKNYNNFVRSKSNKLTKEEYEKQAKELKDDLDQKKKEYDKTKPAKNADAKKTDK
KKLKEEAEAEHRRQMAEKMKQELVDLQRSNDSAEIETMQEGLQKKLREIENEYQARKNAI
DKQESNWKRDNKKAKSAVGKDGLTAEQAEALQKARSQAAVIRKKEIADANREARKEEISA
MVDYLKEYGSFHQQKLALAEEYAQKIAEVDASSVSNAAKAWQKRQLLKEQQKKNSSLSFE
SISRGIDWHVLFSGVGNLAKEMMVPMLEQLRAYVNTDEYKNADADTQQKVTALLQEIRKY
VGTDQSITWRTLDEAVKRFTDSVAVYDRAVKAEEDAVNARNEGKRKLDAGEITNDEYKAL
ENKAQELGDATVKAHESMEDFGAALNRTSDEVANFTSGLTTALNNAKGWQGVEGFNGLQQ
QVGAIDNLKGTLDAILPQMGEGMAKEIGSTLSSTMGTTLSSIGGGISSLLSSGLGSVIGI
VAQIPRLILDLVSGIKGFVTGVLNSITELVSLRWIDDLVVSILDAVGNLINAIFDLPENL
FHVLERIVVNGVGGLLDSVLGRIGNILTLGLLSSSGPSDWFTNSNEKEVAEAIDRLTKRN
ELLEQAIEDLTDEMKTARGSTAIRISNDAERLQRETNDNYKNIARKQAGYHSAHHSWDYY
WKGYSDEQIKRLSEQIGRKWDGNIWSLSPEEMKLLRSNVDMWEQIIKTGKGGYGERVAEK
LNAYIEQAGKLQEITDTLYENLTTTTKKNVFDDFLDSLYALANGSEDVFDDIAENWQAMV
NKMTINNLVGAKFQKNLEVWYEELAKLNKARTNGEITDAEYRKRLDELKKEYDNYVNSAK
SDIEQLRNAGIINSVDKNGGTTQSGKAGAFTTMSQDQATKLEGLFVSGQMHWASIDDRVE
DVAAKMGAAQEHLRKIELNTGSSAQSLKDIKEEMRKITRDGVKVK
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcacaaccggttaaaatagaacttctgatggtggataaactttcacctaat
atggataagagtcagcggaaggtcaaggaactgcaacagaatgtggcagcggcgaacagg
gaattggagaacacggagcagatttccaaccgcctgacgcgttctgtcggcaaattggct
gcggcattcactatcaaggagttcgtatccgaagttgccaaggtgcgtggccagtttcag
cagttggaggttgccttcaccacgatgcttcaaagtgaggaaaaggccaatgccttgatg
atgcaactggtaagaacggcagccacaacacctttcggcttggaagatgtggcgcaagga
gccaagcagctgcttgcctatggctttgaagccgagcgggtgaacgagacactgatacgg
cttggagatattgcagccggactaagtgttcccttaaacgacttggtatatttgtatggc
accacaatggcacaaggcaggttatatacgcaggacttgaaccagttcaccaaccgcggt
cttcctatgataagtgagctggcgaaacaatttggcgtggccgaggacaaggtgcgcgaa
cttgtggaagccggaaaggtaggattccccgaggttcagcaggttatcgagagcctcacc
aatgagggcggcaagttcggtggtttgatggccgagcagtcaaagacgatagtaggacag
attgccaacatagaagacagcatctcgatagcgttcaataagttaggtcagcaaagcgaa
ggtgtcatcaatacgacattgtcaggcatctcgtatgtcgtagagcactatgagcgtttt
ggccgtatcctgttggccatggtggccacctatggcacctaccgagccgccgtcatgctt
accgcagcagctaaagggtgggcaacggccgcagaggctctgcattacaattggctggtt
cttgtggagagagcgcagaaagcgttgaatgccaccatgcttgccaacccttacgtcttg
gtggcaacaatgctcgccggcgtagtggccaccatggttagcgcaaagaccgaaacggag
cgtctgcaagatgcagatgaagcctacgaggcgcagaagcagaaagtcattgaggcggaa
gaagcccataagcgcaggttggaggaactctgccaaatagctggtgatgaagcgttgtct
actgatacaaggcgtgaagcccttaacaagttggagcagaagtatcccaacatctttgcg
aagtatgatactgaatacgccaagctgaagaacatcaagaaaatcaaggaagagatagcc
ttgctcgatggccagaagtcgcttgcgaatcctaagaacgaggtcaagacaatcaacgac
aggataaaaacacttgaaaagaaaaagagcacggaatattgggaagaatccgaccgcaat
ggaagtatgaccaaacgtggcggattgaccaaaggcgaggaagccgaactcaagacacta
tatggcaaaagaaacaatctgactgggcagatacgcaagagccaagtcaatgcttatttt
gaaaagctcacaggtgtcagcaatgatacgctggaaaaagaaatcaaacgccgcgaaaac
ctgttggcagcgatgaaggtaaacggtaagaagtatggaaaaataatacagggcagcaag
agcttgacaggcatatattccaatgacgagctgcagtatcagctcaacaagttggtagct
gaaaggaatcgacgcaatgccaagcgtgataacagcgcagcatggggaacacaggcgaag
aagaattatgagcaagctcttaaaaactacaacaatttcgtcagaagcaagtcaaacaag
ctgacgaaggaagagtatgagaagcaggcgaaggagctcaaggatgaccttgatcaaaag
aaaaaggaatacgacaagaccaagcccgccaagaatgctgacgcaaaaaaaacggacaag
aaaaagctgaaggaagaggcggaagcagaacacaggcgacaaatggctgaaaagatgaag
caggaactcgtagacctgcaacgttctaacgattcggcggaaattgaaactatgcaggaa
ggtctgcaaaaaaagctccgcgaaatagagaacgaatatcaagcccgcaaaaacgccatt
gacaagcaagagagcaactggaagcgtgacaataaaaaggcaaagagtgcggttggcaag
gacggtctgacagcggagcaggcagaggcattgcagaaagcccgtagtcaagccgccgtt
atccgaaagaaagaaatagctgatgccaacagggaggctcgcaaggaagaaatctctgcc
atggtagactacctgaaggagtatggctcattccaccagcaaaagctggcattggcagag
gaatacgcccagaagatagcagaggtggatgcatcgtctgttagcaacgcagcaaaagca
tggcaaaagcgacagctgctgaaggagcagcagaagaagaactcctcgctgtcgtttgaa
agcatctcgagaggcatcgactggcatgtgctgttcagtggcgttggcaatctcgccaaa
gagatgatggtgcctatgttggagcaactgcgcgcttatgtcaataccgacgagtataag
aacgccgacgctgacacccagcagaaggtaacggctctgcttcaggagatacgcaagtat
gtcggtactgaccagagcataacatggcgaacgcttgacgaagccgtcaaacgcttcact
gacagcgtggctgtttatgaccgtgctgtaaaggccgaggaagatgccgtaaacgcacgg
aatgaaggaaagagaaagctcgatgccggtgaaatcacgaacgatgaatataaagctctt
gaaaacaaggcacaggaacttggcgatgctacggtgaaggcgcacgagagcatggaagat
ttcggtgctgccttgaatcggacttcggacgaggtggcaaacttcacaagcgggctgaca
accgccctgaacaacgccaagggctggcaaggcgtggaaggcttcaacggcctgcagcaa
caagtgggtgccattgacaatttgaaaggcacgctcgatgcgatacttccacagatggga
gaaggtatggccaaagagataggcagcacgttgtcaagcacgatgggtacgacactttca
tccatcggtggaggtatatcaagcctgctgtcaagcgggctgggaagtgtcatcggcatc
gtagcccagataccaaggcttatacttgatttggttagtggcatcaaggggtttgtgaca
ggcgtcctcaactcgataacggaacttgtttcgttgcgttggatagacgatctcgtggtt
agtatattggacgcagtcggcaacctgataaatgccatattcgacctgcccgaaaactta
ttccacgtgcttgagcgtattgtcgtgaatggcgtgggtggtcttttggactctgtttta
ggccgtatcggcaatatactgacactgggcttgctgagcagcagcggtccaagcgactgg
tttaccaattccaacgaaaaggaggtcgcagaagccattgacaggctcactaagcgtaat
gagctgttggagcaggctatcgaggatttgacagacgaaatgaagacggcgaggggttct
actgccattcgcatatcgaacgatgcggaaagactgcaacgagagacgaacgacaactac
aagaacatcgcacggaaacaggcaggatatcattctgcccatcatagctgggattactac
tggaaaggttacagcgatgagcagataaaacgcctgagcgagcagataggccgaaagtgg
gatggtaatatatggagtctcagccccgaggaaatgaagctgctccggtccaatgtggac
atgtgggagcagattatcaaaacggggaaaggtggctatggagagcgtgtcgcagaaaag
ttaaatgcctatatagaacaggctggcaagttgcaggagataacagacaccctttacgag
aaccttacaaccacgacaaagaagaacgtcttcgacgatttcctcgattcactatatgct
cttgccaatggctcggaagatgtgtttgatgacattgccgagaattggcaggcaatggtc
aataaaatgaccataaacaacctggtcggggcaaaattccagaaaaatctggaggtatgg
tatgaagagctcgccaaactgaacaaggctcgtacgaacggcgagataaccgatgccgag
taccgcaagcggcttgatgagttgaagaaggaatatgacaactatgtaaatagtgccaag
agtgatatcgagcagctgcgcaatgcaggcatcatcaattctgttgacaagaacggtgga
acgacacagagcggaaaggccggtgccttcaccacgatgagccaagaccaggcgacaaag
cttgaaggactgttcgtcagcgggcagatgcattgggcaagcatagatgaccgggtcgag
gatgtcgctgcaaaaatgggtgccgcacaggagcatctcaggaaaatagagctcaatacg
ggcagcagtgcccaatctctgaaagacataaaggaagaaatgaggaaaattactcgcgat
ggcgtaaaagttaaatga
DBGET
integrated database retrieval system
