Prevotella intermedia: PIN17_A1203
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Entry
PIN17_A1203 CDS
T02058
Name
(GenBank) sigma-70, region 3
KO
K03086
RNA polymerase primary sigma factor
Organism
pit
Prevotella intermedia
Pathway
pit02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PIN17_A1203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pit03021
]
PIN17_A1203
Transcription machinery [BR:
pit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PIN17_A1203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
DUF1667
DUF6285
Motif
Other DBs
NCBI-ProteinID:
AFJ09062
LinkDB
All DBs
Position
II:complement(1232177..1233040)
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AA seq
287 aa
AA seq
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MRQLKITQSITNRESTALEKYLQDISREDLVSLDEEVELAQKIRQGDVKALERLTKANLR
FVVSVAKQYQNQGLSLPDLINEGNLGLIKAAKKYDETRGFKFISYAVWWIRQSIMQAISE
QSRLVRVPMNQMGSINKVRKVIHQFEQEHQRLPSIDEIMEEVDLPKDKIAEVMSMITKKV
SMDAPISSGDDGSLLDVLPNKNSPSADEQLLEEGLKKEIERALVTLSEREQTILRGYFGI
NQREMSLEEIGKQTGLTRERVRQLKEKAIKRLRHNVKSDSLKGYLGE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactgaaaatcacccagtcgattacaaatcgagaaagcacagcactcgaaaaa
taccttcaagacataagccgcgaagacctcgtgagcttagatgaagaggttgagttagca
caaaagataaggcaaggcgatgtaaaagccctcgaaaggcttacaaaagccaatttacga
tttgtcgtctcggtagcaaagcaatatcaaaatcaaggtttatcgcttccagaccttatc
aacgaagggaatctgggactgataaaagcagctaagaaatacgacgaaacacggggattt
aagttcatttcgtatgctgtatggtggattcgacaaagcataatgcaagccatttcggaa
caaagcaggctcgtacgtgtgccaatgaaccaaatgggctcgataaataaggtgcgcaag
gttatccatcagttcgaacaagaacaccaacgcttgcccagcatcgacgaaataatggaa
gaagtagacttaccgaaagacaaaatagcggaagtaatgtctatgattacaaagaaagta
tcgatggacgctcctatttcaagtggcgatgacggcagcttactcgatgtattgcccaat
aagaactccccttctgccgacgaacaactgctggaagaaggattgaagaaagagattgag
cgggcattggtaacactttcagaacgcgaacaaaccatattgagaggatattttggcatc
aatcagcgagaaatgtcgctcgaagaaataggcaaacagactggtctgacacgcgaacgc
gttaggcaactcaaggaaaaagccataaaacgcttgcgccacaacgtaaaaagcgattca
ttaaaaggatacttaggagaatag
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