Prevotella intermedia: PIN17_A1301
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Entry
PIN17_A1301 CDS
T02058
Name
(GenBank) sigma-54 interaction domain protein
Organism
pit
Prevotella intermedia
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
Sigma54_activ_2
AAA_2
AAA_5
HTH_50
HTH_28
HTH_23
HTH_30
Mg_chelatase
HTH_Tnp_ISL3
HTH_29
Mga
RWP-RK
HTH_11
HTH_psq
HTH_17
MCM
HTH_1
AAA
Motif
Other DBs
NCBI-ProteinID:
AFJ08331
UniProt:
A0AA86D3R9
LinkDB
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Position
II:1346541..1347785
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AA seq
414 aa
AA seq
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MNNTELQRIKQRYNIVGNCKALNRALDVSLQVAPTDLSVLIVGESGVGKEIIPRVIHDNS
PRKREKYFAINCGSIPEGTIDSELFGHEKGSFTGAIGESDGYFGTANKGTIFLDEVGELP
LATQAKLLRVLETGEYIRVGGQEVRKTDVRIVAATNVNMRKAVSEGKFREDLFYRLNTIP
IQMPPLRDRGEDILLLFRLFAMQMAEKYRLPKITLTDDAKQIMLHYKWPGNVRQLKNITE
QMSVLSEQREITADMLTDFIPRDPDSTQLAIIEKGGKHSYESERDILYQILYELRGNVSD
LRRDLNTVRKQLEETRALNGARGFEPLPEKHHDTMPVPAKHAVAESPASDSLIEFAEAEE
ISEPEVLNLSDVGRQMVEKALERNNGNRKKAAQELGISDRTLYRRIKQYGLDSK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatacagaacttcaacgcataaaacagcgttacaacatagtgggcaactgcaaa
gcactgaaccgagctttagacgtgtcgttgcaggttgcaccaaccgacctatccgtactt
atcgttggagaaagcggtgtgggtaaggaaattattccccgcgtcattcacgacaattca
ccacgaaagcgggaaaaatactttgccattaactgcggttccatacccgaaggaacaatt
gacagcgaactctttggacacgaaaagggctcgtttacgggtgccattggcgaaagcgac
ggctatttcggcaccgcaaacaaaggcacaatcttcctcgacgaagtgggcgaactgcct
ttggcaacgcaagccaagctattgcgtgtgttggaaacaggcgaatacattcgtgtagga
gggcaggaagtgcgcaagaccgatgtgcgcatagtggctgcaaccaacgttaatatgcgc
aaggcggtgagcgaaggaaagttccgtgaagacctgttttaccgtctgaacaccattcct
attcagatgccgccgcttcgcgaccgtggcgaagatattcttttgctgttcaggctcttt
gccatgcaaatggcagagaagtatcgcttgcccaaaataacactgaccgacgatgcaaaa
caaataatgctacactacaaatggccaggaaacgtgcgacagctgaagaacattaccgaa
caaatgtcggtgttgagcgagcagcgtgagataacggcagatatgctgaccgactttatt
ccgcgcgaccccgatagcacacagcttgccattatagaaaaaggtggaaagcatagctac
gaaagcgagcgcgacatactgtatcagatactttacgaactgcgtggcaatgtgagcgac
ctgcgccgcgacttaaacacagttcgcaagcaattggaagaaacacgtgcattgaacgga
gcgaggggattcgagcctttgcccgagaaacatcacgacacgatgcccgttcctgccaaa
cacgctgttgcagaaagccctgcttccgacagcttgatagagtttgcggaagccgaagaa
atatcagaacccgaagtcttgaacctcagcgatgtgggcagacagatggttgagaaggct
ttggaacgcaacaacggcaaccgaaagaaggctgcacaagagttaggcatcagcgacaga
acgctttacagacgaattaagcaatatggcttggatagtaaataa
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