Prevotella intermedia: PIN17_A1327
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Entry
PIN17_A1327 CDS
T02058
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pit
Prevotella intermedia
Pathway
pit00220
Arginine biosynthesis
pit00240
Pyrimidine metabolism
pit00250
Alanine, aspartate and glutamate metabolism
pit01100
Metabolic pathways
pit01110
Biosynthesis of secondary metabolites
pit01240
Biosynthesis of cofactors
Module
pit_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PIN17_A1327 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PIN17_A1327 (carB)
00220 Arginine biosynthesis
PIN17_A1327 (carB)
Enzymes [BR:
pit01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PIN17_A1327 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
Dala_Dala_lig_C
ATP-grasp
MGS
ATPgrasp_Ter
RimK
ATP-grasp_3
GARS_A
ATP-grasp_5
GSH-S_ATP
Motif
Other DBs
NCBI-ProteinID:
AFJ08595
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All DBs
Position
II:complement(1367797..1371021)
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AA seq
1074 aa
AA seq
DB search
MKDESIKKVLLLGSGALKIGEAGEFDYSGSQALKALREEGVSTVLINPNIATVQTSEGVA
DQIYYLPVQPYFVERVIQKERPDGILLAFGGQTALNCGVELDRLGILEKFNVKVLGTPVK
AIMNTEDRELFVQQLDEIDVKTIKSEACETAEQARKAAATLGYPVIIRAAYALGGLGSGF
ADNEEELNKLCEKAFSFSPQVLVEKSLKGWKEIEYEVVRDQYDNCITVCNMENFDPLGIH
TGESIVIAPSQTLTNSEYHKLRKLAIKIVRHIGIVGECNVQYAFDPKSEDYRVIEVNARL
SRSSALASKATGYPLAFVAAKLGMGYGLFELKNSVTKTTSAFFEPALDYVVCKIPRWDLS
KFRGVDKELGSSMKSVGEVMAIGRNFEEAIQKGLRMIGQGMHGFVENKELEIDDIDAALR
EPTDKRIFVISKAMHKGYTIDQIHELTKIDHWFLHKLKHIIDVDEQLKTCNINTLDKNLL
RTAKVYGFTDFQIARAVGLEDEVGNMHKAVLVVRQLRKSYGILPVVKQIDTLAAEYPAQT
NYLYVTYSGVASDIKFETDRKSVIVLGSGAYRIGSSVEFDWCGVQALNTIRKQGYRSIMI
NYNPETVSTDYDMCDRLYFDELTFERVMDIIDMEMPQGVIVSTGGQIPNNLAIHLDAENV
PILGTKAKDIDNAEDRAKFSAMLNDIGVNQPEWRALTSMADIQEFVDRVGFPVLVRPSYV
LSGAAMNVCSNNDELERFLQLAANVSEDHPVVVSKFIENAKEIEMDAVARDGEIMAYAIS
EHIEFAGVHSGDATIQFPPQKLYVETVRRVKRISRQIAKALHINGPFNIQFMARDNDILV
IECNLRASRSFPFVSKVLKLNFIDLATKIMLGIPVEKPNKNLFDLDYVGIKASQFSFNRL
QKADPVLGVDMSSTGEVGCIGEDTHTALLKSMLSVGQRIPAKNILLSTGGAKQKAEMLDA
AKILKAHGYNLFATGGTSKYLTENGLENTLVYWPSDEGKQPQALDLLHEKKIDMVVNIPK
DLTPRELTNGYKIRRASIDLNIPLLTNSRLASAFIAAFCNVKLDDIDIKAWGEY
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgaatcaataaagaaagtcctgctacttggttcaggcgcattaaagataggt
gaagctggtgaatttgactattctggttcgcaagcactaaaagcactgcgtgaagaaggt
gtttctaccgttctcatcaacccaaatattgctaccgttcaaacatcggaaggcgtggca
gaccaaatttattatctgcccgttcagccttatttcgtagaacgtgttatccaaaaagaa
cgtcccgatggtattcttttggcattcggtggacaaactgcgctgaactgtggcgtagag
ttagaccgtctcggcatactcgaaaagttcaacgtaaaggtgctcggcacacctgtaaag
gcgattatgaacaccgaagaccgtgaacttttcgtacagcagttagacgaaatcgacgtt
aaaaccattaagagcgaggcttgtgaaactgcagaacaagcacgcaaggcagctgcgaca
ttgggctatcctgttattatccgtgcagcttacgcattgggcggacttggcagtggattt
gccgataacgaagaagaactcaacaaactttgtgaaaaagctttctcattctcacctcaa
gttttggtggaaaagagtttaaagggctggaaagaaatagaatacgaagtggtacgcgac
caatacgacaactgtattacggtctgtaacatggaaaatttcgacccattaggtatccat
acgggcgaatctatcgtaattgcaccttcgcaaacccttaccaacagcgagtatcacaag
ctccgcaaattagcaataaagatagttcgccacatcggaatagtgggcgaatgtaacgta
caatatgctttcgaccccaagagcgaagactaccgtgtaattgaagtcaatgcacgcctc
tctcgttcatcggctttagcaagtaaggcgacaggctatccccttgctttcgtggcagcc
aaattaggtatgggttatggtctattcgaattgaagaactctgttacaaagaccacatcg
gctttcttcgagcctgcactcgactatgttgtctgcaagataccacgctgggacttgagc
aagttccgtggtgtagacaaggaattgggctcaagcatgaagtcggtcggcgaagttatg
gctatcggccgcaacttcgaggaagccatacaaaaaggattgcgcatgatagggcaaggc
atgcacggctttgtagagaacaaagaacttgaaatcgacgatatagatgctgcattgcgc
gaacctaccgacaagcgtatcttcgttatttcaaaggcaatgcacaaaggttataccatt
gaccaaattcacgaacttaccaaaatcgaccattggttcctgcacaagctaaagcatatc
attgatgttgatgagcaattaaagacttgcaatatcaacacactcgataaaaacttgctc
cgcacagcaaaggtatatggcttcaccgatttccaaatcgctcgtgcagtaggtttggaa
gacgaagttggcaatatgcacaaggctgtcttggtggttcgccaattgcgtaaaagctat
ggaatcctccctgttgttaagcaaatcgatacgcttgcagccgaatatcctgcacaaacc
aactatctttacgttacctactcgggcgtagcttctgacattaagtttgaaaccgaccgc
aagagtgtcatcgttcttggctcgggtgcttatcgcatcggctcttctgtcgaattcgac
tggtgtggcgtacaggcattaaacaccattcgcaagcagggctaccgctctatcatgata
aactacaaccctgaaaccgtatcgaccgactacgatatgtgcgaccgtctttacttcgac
gaactcacattcgaacgtgttatggacatcatcgatatggaaatgccacagggcgtaatt
gtttctacgggcggacaaattcctaacaacctcgccatacatcttgatgcagagaacgtt
cccatactcggaacaaaggcaaaagacatcgacaatgccgaagaccgtgccaaattctct
gccatgctcaacgatattggtgtgaaccaaccagagtggcgtgcgctgacaagtatggca
gacattcaggaatttgtagaccgtgtgggcttccccgtacttgttcgtccttcttacgtt
ctttctggagctgccatgaacgtttgttccaacaacgacgaattggagcgtttcctccag
ttggcagccaacgtgagcgaagaccacccagtggttgtaagcaaattcattgagaatgcg
aaagaaatagaaatggacgcagtggctcgtgatggcgaaatcatggcttacgcaatatct
gagcacatcgagtttgcaggtgttcactcaggcgatgcaaccattcagttcccgccacaa
aaactctatgtagaaaccgtacgccgtgttaaacgcatcagccgacaaattgccaaggca
ctgcacattaacggtccgttcaacatacagttcatggcgcgcgacaacgacatactcgtt
attgagtgtaaccttcgtgccagccgctctttcccatttgtgagcaaggtattgaaactg
aatttcatcgatttggctaccaagattatgcttggcataccagtggaaaagccgaacaaa
aacctcttcgacctcgactatgtgggtatcaaggcttctcaattctcgttcaaccgcttg
cagaaagccgaccctgtgttgggcgtagatatgagctcaacgggcgaagtgggctgcatt
ggcgaagacacacacacagcattgctaaagagtatgctctctgtcgggcagcgaatacct
gcaaagaacatacttctttctactggtggagcaaagcaaaaggcagaaatgctcgatgct
gcgaagatattaaaggctcatggctataatctttttgcaactggtggtacttctaaatac
ctcacagaaaacggtttagaaaacacattggtatattggccatcggatgaaggcaagcaa
ccacaggcattagaccttctacacgagaagaaaatagatatggtggtgaacattccaaag
gaccttacaccacgcgaacttaccaacggttacaaaatccgccgtgcgtcaatcgacctc
aacataccattgctcaccaacagccgccttgcaagtgctttcattgcggcgttctgcaat
gtgaagttagacgatattgacatcaaggcttggggcgaatactaa
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integrated database retrieval system