Prevotella intermedia: PIN17_A1338
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Entry
PIN17_A1338 CDS
T02058
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pit
Prevotella intermedia
Pathway
pit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PIN17_A1338 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pit03400
]
PIN17_A1338 (xseB)
Enzymes [BR:
pit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PIN17_A1338 (xseB)
DNA repair and recombination proteins [BR:
pit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PIN17_A1338 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
FliS
Asp-B-Hydro_N
FlaC_arch
Motif
Other DBs
NCBI-ProteinID:
AFJ08934
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All DBs
Position
II:1383225..1383404
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AA seq
59 aa
AA seq
DB search
MKYEEALGKLEAIVDKMERGDMDIDTMASELKKAQGLIKVCKDKLTHTDEEIKKLLETK
NT seq
180 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgaagaagcacttggaaaattggaagctattgtagacaaaatggaacgtggc
gacatggacatagatactatggcaagtgaattaaagaaggcacaaggattgataaaggtg
tgtaaggataagctgacacacaccgacgaggaaataaagaaactgcttgaaacaaaataa
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