Prevotella intermedia: PIN17_A1469
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Entry
PIN17_A1469 CDS
T02058
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pit
Prevotella intermedia
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pit03016
]
PIN17_A1469 (trmE)
Transfer RNA biogenesis [BR:
pit03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PIN17_A1469 (trmE)
Prokaryotic type
Methyltransferases
PIN17_A1469 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
ABC_tran
Roc
Ras
AIG1
GCV_T
Guanylate_kin
cobW
MMR_HSR1_Xtn
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFJ08081
LinkDB
All DBs
Position
II:complement(1518456..1519859)
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AA seq
467 aa
AA seq
DB search
MQAYNNLLNSSETICALATQPGGAIGVIRVSGSKAIEIVDSIFSRPILNIPANTLHYGEI
LDKDHQTIDEVVVSIWRAPHSYTGEDLVEISCHGSAYILEQVLHRLIESNCRQAKPGEYT
QRAYLNGKMDLSQTEAVADLIASTNKASYKLALSQLKGHFSSELSTLRNQLLKINSLLEL
ELDFSDHEELEFADRTELIALSEEIDHKVTTLARSFKTGQALRNGIPVAIIGKTNVGKST
LLNCLLRDNRAIVSDIHGTTRDIIEDTISINGVDFHFIDTAGIRKTTDYVEQLGIERTLA
TLEKAQIVLWVVDNEPTESEKKEILAQCTDKHLILVHNKVDDLTEPTNQQNHAATSHDST
YTYHEIAISGKYNLGINQLESLIYKVADLPEITENTTIVTNARHYDALTRAHASLLRVQE
AMAMNLSGDLISEDLKDTISILAEITGDQITPQETLHNIFKHFCIGK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatacaacaaccttctcaactcttctgaaactatctgtgcattggcaacacag
ccaggtggcgcaataggtgtaatcagagtttcaggcagtaaagcaatcgaaatcgtggac
tccatattctcacgaccgattctgaacatccctgccaacaccttgcattatggagaaata
ctcgataaagaccaccaaaccattgatgaagtggtggtttcaatctggcgtgcacctcat
tcctacactggcgaagacttggtagaaatatcgtgccacggctcagcatacatcttagaa
caggtcttacatcgcttaatcgaaagtaactgccgccaagccaagcctggtgaatacact
caacgtgcctatctgaacggcaaaatggacttatcgcagaccgaagccgttgccgacctc
attgcctctaccaacaaggcgtcttacaaacttgccctttcacagctcaaagggcacttc
tcttcagagctttccacgctgcgcaaccagcttctcaagattaattcgcttctcgaactc
gaactcgacttctccgaccacgaagaattagagtttgccgaccgtaccgaattgattgcc
ctctctgaagaaatcgaccataaagtaacaactcttgcacgttcattcaagaccggacaa
gccctcagaaacggtattcctgtagccattataggcaaaacaaacgtagggaaatctacc
cttcttaactgcctcctccgtgataatcgcgccattgtaagcgatattcacggaactacc
cgcgatattatagaagacaccatcagtattaatggtgtagatttccactttatcgatact
gcaggcatacgcaaaactaccgactatgttgagcaattaggcatcgaacgcaccctcgcc
actctcgaaaaagcccaaatcgtgctatgggttgtagacaatgaacccaccgaaagcgag
aaaaaagaaatcctcgctcagtgtaccgataagcacttaattctcgtacacaacaaagta
gacgaccttactgagcctacaaatcaacagaaccacgctgcaacctcgcacgattcaact
tatacttatcacgaaattgccatatcaggcaaatacaacttgggtattaaccaacttgaa
tccctaatatataaggtagccgacttgcccgaaataacagaaaacaccactatcgttacc
aatgcacggcactacgatgccctcactcgtgcccacgcttcccttcttcgagtgcaagaa
gcaatggcaatgaatcttagtggcgaccttatttccgaagatttaaaagacactatctcc
atactcgccgaaattacaggcgaccaaattactccacaggaaacgctgcataacatattt
aaacatttttgcatcggaaaataa
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