Prevotella intermedia: PIN17_A1486
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Entry
PIN17_A1486 CDS
T02058
Symbol
uvrA_1
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
pit
Prevotella intermedia
Pathway
pit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PIN17_A1486 (uvrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pit03400
]
PIN17_A1486 (uvrA_1)
DNA repair and recombination proteins [BR:
pit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PIN17_A1486 (uvrA_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PIN17_A1486 (uvrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
SMC_N
nSTAND1
AAA_21
UvrA_DNA-bind
AAA_16
AAA_29
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_25
Anti-TRAP
nSTAND3
ATPase
Motif
Other DBs
NCBI-ProteinID:
AFJ08325
LinkDB
All DBs
Position
II:1539408..1542269
Genome browser
AA seq
953 aa
AA seq
DB search
MDKKNKQEDGYIEVKGARVNNLANVNVKIPRGKFVIIAGVSGSGKSSLAFDTLYAEGQRR
YVESLSAYARQFLGRMAKPEVDFIKGLPPAIAIEQKVISRNPRSTVGTSTEIYEYLRLLY
ARIGRTINPATGEEVKRHTVEDVIQKVQSYSAGTKFCILAPLHVREGRSIMAQLEMEVQE
GYARIYVDGEIVRIEDWIEAHDEKEIERVENVYLVIDRLSVDDSKEIISRLTDSCETAFF
EGDGMLRLMFFPSKLSYDFSTRFEADGIKFEDPNDNMFSFNSPLGACPTCEGFGRIMGID
ERLVIPNSSLSVYEGCVQCWHGEKMKVWHDEFCRRAAKDNFPIFKPYFELSQTEKDQLWH
GLPSEAVNPLSDRICIDSFFQMVKDNQYKIQYRVLLSRYRGKTICPDCHGRRLKKEATLV
KIAGKAITDLVEMPIINLKEWFDNIELTEQERNISKRLMLEITNRIQFLVDVGLGYLTLN
RQSNSLSGGESQRINLTTSLGSSLVGSLYILDEPSIGLHSRDTDRLIHVLKELQAIGNTV
IVVEHDEEIIRSADCLIDVGPDAGRLGGHIVYNGIVPEINDANKADLLKAHADSYTIKYL
TAAETIEVPQSRRPWNLSVEIKGCRMNNLKGLDARIPLNVFTVVTGVSGSGKSSFIKGTL
YPALKRRLDEVTDLPGEYASLTGDLEQIVHVEFVDQNPIGKSSRSNPATYVKAYDEIRKL
FSEQQLSKQMGYTPQFFSFNADGGRCEECKGAGVITIEMQFMADLVLECEECHGKRFKRE
ILDVTFAGKNINDVLDMTVSEAIQFFTANKQKSIVTRLQPLEDVGLGYIKLGQSSSTLSG
GENQRVKLAYFIGKERQEPSLFIFDEPTTGLHFHDIKRLLKAFDALIAKGHSVLVIEHNL
DVIKCADYILDIGPDGGDNGGKLVAFGTPEEIANNKDSLTGKYLAEKLYTNNL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaataaacaagaagacggatatatagaagtaaaaggtgccagagtaaac
aacttggcgaatgtaaacgtgaagattccacgtggaaagttcgtcattatagctggtgtt
tcaggttctggtaagtcatcgttggctttcgatacgctttatgcggaagggcagcgcaga
tatgttgagagcttgtcggcatacgcccgtcagttcttaggcagaatggcaaagcccgaa
gtagactttataaaaggacttccacctgccattgcaatagaacaaaaagttatatcacga
aatcctcgttctacggttggtacctcgacggagatatacgaatatctgcgattgctttat
gcacgaataggcagaaccattaatcctgcgacaggagaagaggtgaaacgacataccgta
gaagatgttatacagaaagtgcaaagctattctgctggtacaaagttctgtattcttgcc
cctttgcacgttcgtgagggtaggagtattatggcgcagcttgagatggaagtacaggaa
ggctatgcacgcatttatgtagatggagagattgtgcgcattgaagattggatagaagcg
cacgacgagaaggaaatagaaagagtagaaaacgtttatcttgttatcgaccgtctttcg
gttgatgatagcaaggaaatcatctcgcgccttacggactcttgcgaaacagctttcttt
gaaggcgatggtatgttgaggctgatgttcttcccatcgaaactctcttacgacttttct
acgcgctttgaggctgacggtattaagtttgaagaccctaacgacaatatgttttcgttt
aattcaccgctgggagcttgtcctacttgcgagggctttggacgtattatgggcattgac
gaacgcttggtaatacctaacagttcgctttctgtttacgaggggtgcgtgcaatgttgg
catggcgaaaagatgaaagtatggcacgatgagttttgccgtcgggctgcaaaggataat
tttcccatcttcaaaccttattttgaactgtcgcaaacagagaaagaccaactgtggcac
ggacttccaagcgaagccgtcaatccgctttccgatcgtatctgtatagattctttcttc
caaatggtgaaggacaatcaatataagatacagtatcgtgtcctcttgagccgatataga
ggcaagactatctgccccgattgccacggacggcgattgaaaaaggaagcgactttggtg
aaaatagctggaaaagctattaccgatttggtggaaatgccgattataaacctgaaggaa
tggttcgataatatagagctgacagagcaagagagaaacattagtaagcgattgatgttg
gaaataaccaaccgtattcagtttcttgtagatgtcggacttggttatcttacactgaat
cgccaatcaaacagtctcagtggtggcgaaagtcagcgcatcaatcttacaacatcgtta
ggttcgtcgttggtaggctcgctttacatcttggacgaaccaagtatcggactgcatagt
cgcgataccgaccgtcttatccacgtcttgaaagagttgcaagccatcggaaatactgta
attgtggtggaacacgacgaagagataatacgctcggcagactgtcttattgatgtcggt
ccagatgcaggacgattgggtgggcatatagtatataatggtatcgtacctgaaatcaac
gatgcaaacaaggcagacttgttgaaagctcacgccgattcgtacacgataaagtatctt
actgctgcagaaaccattgaagtgccgcagagtcgtcgcccttggaatctttctgttgaa
ataaaaggttgccgaatgaacaacctgaaagggttagatgccagaataccgctcaatgtc
tttactgttgtaacaggtgtcagtggaagtggaaagtcgtcgtttataaagggaacactc
tatcccgcattgaagcgtcgccttgatgaagtaaccgatttgcccggtgaatatgcttcg
cttacaggcgatttggagcagatagtgcacgtggaatttgtagaccaaaacccgataggg
aagagttcgcgctccaatcctgcaacttatgtgaaggcatacgacgaaatcagaaagctg
ttttcagagcagcaactttcaaagcaaatgggctatacccctcaatttttctcgttcaat
gcagatggcggacgatgcgaagaatgtaaaggtgcaggggtaataaccattgaaatgcag
tttatggcagacttggttttggaatgtgaggaatgtcatggcaaacgctttaagcgagaa
atccttgatgttacctttgcagggaaaaacattaacgacgtgttggatatgacggtttcc
gaagcaatacagttctttaccgccaataagcagaagtcaatcgttactcgcttgcaacca
ttggaagatgttggattgggctatattaagttagggcaaagttcttctacgctttcgggt
ggcgaaaaccaacgtgtaaagcttgcttattttataggaaaggaacggcaagaaccgtcg
ctgttcatcttcgacgagccaacgacaggtttacatttccacgatataaaacgcttgctg
aaagccttcgatgctctcatagcaaagggacattcggtgcttgttattgaacacaacctt
gatgtaataaagtgtgcagactacattctcgacattggacctgatggaggcgataatggt
ggcaaactcgttgcatttggcacccctgaagagatagccaacaacaaggatagcttaacg
ggaaaataccttgcagagaaactatatacaaataatttatag
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