Prevotella intermedia: PIN17_A1612
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Entry
PIN17_A1612 CDS
T02058
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pit
Prevotella intermedia
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pit03000
]
PIN17_A1612
Transcription factors [BR:
pit03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PIN17_A1612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
LacI
Peripla_BP_1
HTH_3
HTH_26
TetR_N
HTH_7
HTH_38
HTH_Tnp_ISL3
BRCA2
Motif
Other DBs
NCBI-ProteinID:
AFJ08732
LinkDB
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Position
II:1672758..1673822
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AA seq
354 aa
AA seq
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MGDRIRIKDIAARAGVSVGTVDRVLHKRPNVSKSALEKVEKVLKEINYQPNVYASALAYN
KSYTLYCILPKHTSEAYWQEIEIGAIKAVEFRRDFHLNIKLRHFSRLQPESYLETCQRCL
DEKPDGVILVPTTLEATKVFADELHKRNIPFVLLDSYMPDLNPLSFYGQDSFQSGYFAAK
MLMLIAQKEKSIMLMRQTFEGKITSRQQENREVGFRNYMEKFYPKVEIKVLDLPMGKDKA
TYNAMLEDFFTANPDIHHCFTINSKAYIVGDFILETNRKNVQIMGYDMVPRNAECMRKGS
ISFLIAQHAYQQGFSSVDTLFQKIVLKKDVRPINYMSIELLSKENMDFYHRTRI
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatagaataagaataaaagatatagctgcaagggcgggcgtgagcgttggtact
gtagatagagttctgcacaaacgccctaatgtttctaagtctgcattggagaaagtagag
aaagttttgaaggaaataaactaccaacccaatgtttacgcaagcgcattggcatacaac
aagagctatactttatactgcatattgcccaaacacacgagcgaagcctattggcaagag
attgaaataggggcaataaaggccgttgaattcagacgcgactttcatttgaacataaag
ttaaggcattttagccgcctccaaccagagtcgtacttggaaacttgccaaagatgtttg
gacgaaaagcccgatggagttatattggttccaacaacgttagaggctacaaaggtcttt
gccgacgaacttcacaagcgcaatatcccgtttgtattgttggattcgtatatgcccgac
ttgaacccactgtcgttttatggacaggattcgtttcaaagtggctattttgctgcaaag
atgctgatgctgattgcacaaaaagaaaagtcgataatgctgatgagacaaacctttgaa
gggaaaattacgagccgacagcaagaaaaccgagaggtgggatttcgcaactatatggaa
aagttctatccgaaagttgaaataaaggtactggacctgcctatgggtaaagacaaggca
acttacaatgcgatgttggaagactttttcactgcaaatcctgatattcatcattgcttc
accatcaattcaaaggcatacattgtaggcgatttcattttagaaacaaaccgaaaaaac
gtgcagattatgggctacgatatggtgccccgaaacgcagaatgtatgcgaaaaggcagc
atttccttccttatcgcacagcatgcttaccaacaaggtttttcaagtgtggacacattg
tttcagaagattgtcttaaagaaagacgttcgccctatcaactatatgtcgatagaactt
ttatcgaaagaaaatatggacttctaccatcgtacgcgaatttag
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