Prevotella intermedia: PIN17_A1674
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Entry
PIN17_A1674 CDS
T02058
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pit
Prevotella intermedia
Pathway
pit03410
Base excision repair
pit03430
Mismatch repair
pit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PIN17_A1674 (recJ)
03430 Mismatch repair
PIN17_A1674 (recJ)
03440 Homologous recombination
PIN17_A1674 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pit03400
]
PIN17_A1674 (recJ)
DNA repair and recombination proteins [BR:
pit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PIN17_A1674 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PIN17_A1674 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PIN17_A1674 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFJ08709
LinkDB
All DBs
Position
II:complement(1739341..1741065)
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AA seq
574 aa
AA seq
DB search
MQLKWNYTPSTSEQTNAAKELGEKLSINPILASLLIRRGITTESAAKRFFRPQLSDLINP
FLMQDMDIAVDRLNDAMGRKERIMVYGDYDVDGCTAVALVYKFLRQFYSNIDYYIPDRYD
EGYGVSKKGIDFAKESGVKLIIILDCGIKAVEEISYAKEQGIDFIICDHHVPDNNMPPAV
AILNPKRADDSFPFKDLCGCGVGFKFMQAFAKNNNIPFSRLIPLLDFCAVSIAADLVPVV
GENRILAFHGLKQLNQNPSVGLQAIVDICGLSGREISMSDIIFKIGPRINASGRMESGKE
SVDLLVERDLATALLEAKHIDKYNDKRKDVDRQMTEEANQIVERLESQKHQNSIVLYDEH
WKKGVIGIVASRLTEIYYRPTIVITREGDLATGSARTAAGFDLYSAIESCSDLLTNFGGH
TYAAGLTLKWENVKEFRNRFQQYVDEHIEPYQTEATLDIDAVIDFKDITKKFHNDLKRFA
PFGPENVKPLFCTKEVFDFGTSKVVGREQEHIKLELVDSKSNNVMNGIAFGQSRSARYIK
SKRSFDIVYTIEDNVFKRGAVQLQIEGIRPSENE
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaaaatggaactacacaccatctacatctgaacagacaaatgcagcaaaggaa
ttgggcgagaaactcagtattaatcctattcttgcctcgttgctcataaggcgcggaata
acaaccgaaagtgcggcaaaacgtttctttcgtccacagctttccgaccttatcaatccg
tttctaatgcaagatatggatattgcagtcgatagactgaacgatgcaatggggcgcaag
gaacgcattatggtctacggcgattacgacgtagacggttgcacggcggtagcattggtg
tataaatttctgcggcagttctattctaatatagattactatattccagaccgttacgac
gaggggtatggtgtaagcaaaaagggaatagactttgcaaaggaaagtggagtgaagctc
attatcatactcgattgcggtataaaggcagtcgaagagattagctatgcaaaggaacaa
ggcattgacttcattatctgcgaccaccacgtccctgataacaatatgcctccagcagta
gctatattaaatccgaaacgtgctgatgacagcttcccatttaaggatttgtgtggttgc
ggtgtaggtttcaagttcatgcaagcctttgccaagaacaacaatataccgttctcgcgg
cttattccgctgctcgatttctgcgctgtgagtattgctgccgaccttgtccccgttgta
ggcgaaaaccgtatccttgctttccacggcttaaaacagctaaatcaaaatccaagtgtg
ggcttgcaagccattgtagatatttgcggactcagcggaagggaaatttcaatgagcgat
attatcttcaagataggtccacgcattaacgccagcggccgtatggagagcggaaaggaa
agtgtagacctgcttgtggaacgtgatttggctactgcgctgttggaagcaaagcatatt
gacaaatacaacgataagcgaaaagatgtagacaggcagatgaccgaggaagccaaccaa
attgttgagcgacttgagagccagaaacaccaaaacagcattgtactttacgatgagcat
tggaagaaaggagttattggtatcgtggcttcccgtctcactgaaatttactatcgtcct
accatagtcattacccgagaaggcgatttagccacaggctcggcacgaactgcagcaggt
ttcgacctctattctgctattgagagttgcagcgacttgctcaccaactttggtgggcat
acctatgcagcaggcttaacgctgaaatgggagaatgtaaaggaattccgaaaccgtttc
caacagtatgttgatgaacacatcgagccttatcagacggaggcaactttggatattgat
gctgttatagactttaaagacattaccaagaagtttcataacgacttgaaacgctttgca
ccatttggtccagaaaacgtaaagccgttgttctgtacgaaagaagtgttcgattttggc
accagcaaggttgtgggcagagagcaagagcacattaagttggagcttgtcgattcaaag
tcgaacaacgttatgaatggcattgctttcggacaaagtcgttcggcacgctatataaag
tcgaaacgctcgttcgatattgtttatacaatagaagataatgtgttcaagcgtggtgct
gttcaacttcagatagaaggcattcgcccttcggaaaatgaatag
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