Prevotella intermedia: PIN17_A1923
Help
Entry
PIN17_A1923 CDS
T02058
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pit
Prevotella intermedia
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pit03016
]
PIN17_A1923 (truB)
Enzymes [BR:
pit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PIN17_A1923 (truB)
Transfer RNA biogenesis [BR:
pit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PIN17_A1923 (truB)
Prokaryotic type
PIN17_A1923 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AFJ08606
LinkDB
All DBs
Position
II:complement(2004258..2004965)
Genome browser
AA seq
235 aa
AA seq
DB search
MNFKEGVIIPIDKPYGITSFKALAHVRYLCSKAQGGRVKIGHAGTLDPLATGVLILATGK
MTKQIETLQTHTKEYVATMQLGATTPSYDMEHEENETFPTEHITRELIETALQQFIGDIE
QVPPTYSAVKVNGQRAFDYRRNGEDVVLKPKKIRIDEIEITRFDAEKMQLTLRVVCGKGT
YIRALARDLGRAINSGAYLVALRRTQVGDIRVEKCINYDHFQEWLNEQNIEITDK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaaggaaggtgttatcatacccatcgacaaaccgtatggtataacgagtttc
aaggcgttggcgcacgtgcgttatctttgctcgaaggcgcagggaggacgtgtaaagatt
ggtcatgcaggtacgctcgacccattggcaactggtgttctcattcttgcaacaggcaaa
atgaccaagcagatagaaactttgcagacgcatacaaaggaatatgttgccacaatgcag
ttgggagcgaccacaccaagctacgatatggagcacgaggaaaacgaaactttccccaca
gaacatatcacgagagagctgatagaaacggcattgcagcagtttatcggcgatatagag
caggtgccgcctacttacagtgctgtaaaagtgaatgggcaacgtgctttcgactatcgt
agaaacggcgaggacgtcgttctgaaacctaagaaaataaggatagacgaaatagaaatt
acccgtttcgatgccgagaagatgcagctcacactccgagttgtttgcggcaagggaacc
tacatacgcgcattggcacgcgatttagggcgtgctatcaatagcggtgcctatcttgtt
gcgctccgacgcacccaagtaggcgatataagagtagaaaaatgtataaattacgaccat
ttccaagaatggttgaacgaacagaacatagaaattacagataaatga
DBGET
integrated database retrieval system
