Polynucleobacter ibericus: AOC20_00015
Help
Entry
AOC20_00015 CDS
T09789
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
piu
Polynucleobacter ibericus
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
piu03032
]
AOC20_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
piu03400
]
AOC20_00015 (gyrB)
Enzymes [BR:
piu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AOC20_00015 (gyrB)
DNA replication proteins [BR:
piu03032
]
Prokaryotic type
DNA Topoisomerases
AOC20_00015 (gyrB)
DNA repair and recombination proteins [BR:
piu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AOC20_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QWE08662
LinkDB
All DBs
Position
2852..5350
Genome browser
AA seq
832 aa
AA seq
DB search
MTEEKKVVEQYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAG
YCSEITVVIQTDNSISIVDNGRGVPTGIKYDDKHEPKRSAAEIVMTELHAGGKFDQNSYK
VSGGLHGVGVSCVNALSKWLKLTIRRDGKAHYMEFARGVIQNRNVVDENGVLVSPITVTG
DTELSGTEVHFLADETIFGNVEFHYEILVKRIRELSFLNNGVHIKLIDQRTGQEEDFAFS
GGVKGFVEYINQTKNVLHPNIFYAEGVRPSDLGGQITAEVSMQWNDSFSEQVLCFTNNIP
QRDGGTHLTGLRAAMTRVINKYIDENEVAKKAKVEISGDDMREGLACVLSVKVPEPKFSS
QTKDKLVSSEVRGPVEEIVAEALSAYLQERPADAKILCGKIVDAARAREAARKARDMTRR
KGALDGLGLPGKLADCQEKDPSKSELFIVEGDSAGGSAKQGRDRRFQAILPLKGKILNVE
KARFDKMLASQEVVTLITVLGTGIGIEEYKADKLRYHRIIIMTDADVDGSHIRTLLLTFF
YRQMPELIERGHIYIAQPPLYKVKFGKNEQYIKDDNELNQLLLKIALETASLQTPSGEVV
EGEALNELAKHYQVIQSIVDRLSRTIDEDALRAIASGTPLNLDTEKSANESADRLRQALA
DSLNPLALPPEIIVQKEDRTERFRLLLSRRIHGNLKLSSINSDFVHGDDYQSLANAAAVL
SGKVVAGSKVRRGDPDKNQKEQTIGDFRAAFAWLLSEAERVLSRQRYKGLGEMNPSQLWE
TTMDASSRTLLQVKIEDAIAADQVFTTLMGDEVEPRRAFIEKNALIARNLDV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaaaaaaagtagtagagcagtacggcgctgcatcgattcaaatcctagag
ggtcttgaggctgttcgtaaacgtcctggcatgtacatcggagacacctctgatggcact
ggtttgcatcatctcgtatttgaggttttagataactccattgatgaagccttagctggg
tattgttctgagattacggtcgttattcaaactgataactccatttctattgttgataat
ggccgcggtgttccaacaggcattaaatacgatgacaagcatgagccaaaacggagcgct
gctgaaattgtgatgaccgagcttcacgctggtggtaagtttgaccaaaacagctataaa
gtctctggcggtctccatggtgtgggcgttagttgtgtaaacgcattatctaaatggctt
aaattaaccattcgtcgtgatggcaaagcgcactacatggagtttgcccgcggcgttatt
caaaaccgcaacgtagtggatgagaacggtgttttagtttcaccaatcactgttactggt
gataccgagctttcgggaacagaggttcactttttagctgatgagactatttttggaaat
gtagaattccattacgaaatcttggttaaacgtattcgcgagctttcttttttaaataat
ggcgtacacattaaactgattgatcaacgcaccggccaagaagaggattttgctttctct
ggcggcgtgaagggttttgttgaatatattaatcaaaccaaaaacgtactccatccaaac
attttttatgcagaaggtgtgcgtccatcagatctgggtggccaaattacagcagaagta
tcaatgcaatggaatgacagctttagtgaacaagtactttgttttactaacaacattcca
caaagagatggcggcacacatttaactggtttgcgcgcagcaatgacacgtgtcattaat
aaatatattgatgagaacgaagttgctaaaaaagcaaaagtagaaatttctggtgacgat
atgcgcgaaggtttggcctgcgttttatctgtcaaagtgcctgagccaaaattctccagt
caaacaaaagataaattagtgtctagcgaggtgcgtgggcctgtagaagaaattgttgca
gaggctttaagcgcctatttgcaagagcgtccagctgatgccaagattttgtgcggcaag
attgttgatgcagcgcgcgctcgcgaagctgcacgcaaagcacgtgatatgacacgtcgt
aagggcgctctggatggtttaggtttgccgggcaagttggccgactgccaagagaaagac
ccctctaaatctgaattatttattgttgagggtgattccgcgggcggctctgccaaacag
gggcgtgatcgtcgtttccaagcaattcttccactaaaagggaaaatcctaaacgttgaa
aaagcacgttttgacaaaatgcttgccagtcaagaagtggtcaccttaattactgttctt
ggtaccggcattggtattgaggaatataaggcagacaaacttcgttatcaccgcatcatc
atcatgaccgacgcggacgttgacggtagccacatcagaacattgttactaacgtttttc
tacagacagatgcccgagttaattgaacgcggccatatttacattgctcagccaccacta
tataaagtgaagtttggcaagaatgagcagtacattaaagatgacaatgaactcaatcag
ttgttactaaaaatcgcactagaaacagcatcattacaaacaccttctggtgaggttgtc
gagggcgaagcactcaatgagctagcaaaacattaccaagtcattcaatcaattgttgat
cgcctgtcgcgcactattgacgaagacgctttgcgtgcaattgcatctggcacaccactg
aatctggatacagaaaaatcagccaatgaatccgccgaccgcttaaggcaggcactagcg
gattctttgaatcccttggccttgccaccagagatcattgtgcaaaaagaagatcgtact
gagcgcttccgtttgttgttatcacgacgcattcatggaaatttgaagttgtcttcaatt
aactcagattttgttcatggtgatgattatcaaagcctagcgaatgccgcagcagtttta
tcgggcaaggtggttgcaggctcaaaagttcgtcgcggcgatccagataaaaaccaaaaa
gaacaaaccatcggcgacttcagagctgcctttgcttggttattgtctgaggcagaacga
gttttaagccgtcagcgctataaaggccttggtgagatgaatccttcgcagttatgggaa
accaccatggatgcaagctcaagaacgcttttacaggtgaagatagaggacgcgattgct
gcggaccaagtctttacaacactcatgggagatgaggttgagcctcgtcgcgcgtttatt
gaaaagaacgcccttattgcacgcaacctagacgtttaa
DBGET
integrated database retrieval system
