Polynucleobacter ibericus: AOC20_01080
Help
Entry
AOC20_01080 CDS
T09789
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu02024
Quorum sensing
piu03060
Protein export
piu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AOC20_01080 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AOC20_01080 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AOC20_01080 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
piu02044
]
AOC20_01080 (ffh)
Enzymes [BR:
piu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
AOC20_01080 (ffh)
Secretion system [BR:
piu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AOC20_01080 (ffh)
Eukaryotic Sec-SRP protein
AOC20_01080 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
YqeC
AAA_16
cobW
AAA_31
ATP_bind_1
T2SSE
nSTAND3
AAA_14
Helicase_RecD
Thymidylate_kin
AAA_33
APS_kinase
AAA_30
AAA_19
Rad17
KTI12
TsaE
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QWE08847
LinkDB
All DBs
Position
complement(196352..197734)
Genome browser
AA seq
460 aa
AA seq
DB search
MLENLTDRLSRVVKTMRGQARLTEENTAEMLREIRLALLEADVALPVVKSLLEQIKFKAL
GEEVVGSLSPGQALVGVVQRELAQVMRGDTLQSGELNLATQPPAVILMAGLQGAGKTTSV
GKLAKWLQEKKKKKVLTVSCDVYRPAAIEQLETVTKQVGAEFFPSDISQQPNDIAIAALD
WARRHYFDVVLVDTAGRLGIDEALMQEIKTLHASLNPIETLFVVDAMLGQDAVNTAKAFH
EALPLTGVILTKLDGDSRGGAALSVRQVTGVPLKFIGVAEKMDGLEAFDAERMANRILGM
GDILALVEQAQQHVDVAKAEKLASKISKGGFDLEDFRDQLMQMQKMGGMASLMDKLPSQV
AQAASKANLSNADKQTTRMRGIIDSMTPQERRKPELLKASRKRRIAAGSGVEVQEVNRLL
AQFEQMQTMMKQFKGGKMARTMASMAAKGAAKGIGGLFKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctagaaaacctcaccgaccgtctatcacgcgttgttaaaacaatgcggggtcaggca
cgcctgaccgaagaaaatactgcagaaatgctgcgggaaatccgtctagccttactggag
gctgacgtagccctgccagtggtgaaatctctgctggaacaaattaaatttaaagccctt
ggtgaggaagtggttggcagcctcagcccaggccaagctctggtgggcgttgtgcaacgt
gaacttgctcaagtcatgcgtggcgatactttgcaaagcggtgaactcaacctagccacc
caacctccagcagtaattttgatggcgggcttacagggtgcaggtaaaacgacctctgtt
ggtaagcttgccaaatggttgcaagagaaaaagaagaaaaaagttctaaccgtttcttgt
gacgtttatcgtccagccgcgattgaacaattagagaccgtcaccaagcaggtgggcgcc
gaatttttcccaagcgatattagtcaacaaccaaatgacattgctattgctgccctggac
tgggcgcgtcgtcattattttgatgttgtcttagtggataccgcgggtcgcctaggcatt
gacgaagcactcatgcaagaaatcaaaactttgcatgccagcctcaacccaattgaaacc
ttattcgtagtggatgccatgctcggccaagatgccgtgaatacagctaaggccttccat
gaagctctaccattgactggcgtgatcctcactaagctagatggtgattcccgcggtggt
gcagcgctttctgttcgtcaggttacgggtgtgccactcaaatttatcggcgttgccgaa
aagatggatggcttagaagcatttgatgctgaacggatggccaatcgtattttgggcatg
ggcgatattctggccttggtagagcaagctcaacaacacgttgatgtagccaaagcagaa
aagttagcaagcaagatttccaagggtggctttgatcttgaagattttcgagatcaactg
atgcagatgcaaaagatgggtggcatggctagcctgatggataagttgccgagccaagtt
gcgcaagcagcatccaaagcaaatctcagtaacgccgataaacaaactacgcgcatgcgt
ggaattattgacagcatgacaccgcaagagcgtagaaaacctgagctgctcaaagcgagt
cgcaagcgccgtattgctgcaggctctggagtagaggtgcaagaggtcaatcgcttgcta
gctcaattcgagcaaatgcaaaccatgatgaagcaattcaaaggtgggaagatggcgcgc
accatggccagcatggctgctaaaggagccgccaagggcattggcggactctttaagaaa
taa
DBGET
integrated database retrieval system
