Polynucleobacter ibericus: AOC20_01340
Help
Entry
AOC20_01340 CDS
T09789
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu00521
Streptomycin biosynthesis
piu00523
Polyketide sugar unit biosynthesis
piu00525
Acarbose and validamycin biosynthesis
piu00541
Biosynthesis of various nucleotide sugars
piu01100
Metabolic pathways
piu01110
Biosynthesis of secondary metabolites
piu01250
Biosynthesis of nucleotide sugars
Module
piu_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AOC20_01340 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AOC20_01340 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
AOC20_01340 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AOC20_01340 (rfbB)
00525 Acarbose and validamycin biosynthesis
AOC20_01340 (rfbB)
Enzymes [BR:
piu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AOC20_01340 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
3Beta_HSD
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QWE08893
LinkDB
All DBs
Position
251414..252472
Genome browser
AA seq
352 aa
AA seq
DB search
MILVTGGAGFIGGNFVLDWLANPNAEGIINLDKLTYAGNLHTLKPLQGDSRHIFVHGDIG
DKALVTKLLKQYKPRAIVNFAAESHVDRSIHGPADFVETNIVGTFNLLECAREFWNALEG
KAKEEFRFHHVSTDEVYGSLSATDPAFTETNPYEPNSPYSASKAASDHLVRAWFHTYGLP
VVTTNCSNNYGPYHFPEKLIPLVILNALNSKPLPIYGDGQQIRDWLYVGDHCLAIREVLA
KGKLGETYNIGGWNEKANIDVVKTICSILDELKPRADGRSYVEQITYVKDRPGHDRRYAI
DASKVERDLGWRPAETFDTGIRKTVQWYLDNHVWIDGVVSGSYRDWVEKQYR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgattctagtgactggaggcgctggttttattggcggcaatttcgttttagattggctg
gccaatccaaatgccgaaggcattattaacctcgataaattgacctatgccggtaatcta
catactttaaagcctcttcagggtgattcccgccatatatttgttcacggtgatattggt
gacaaagcgttggttaccaaattattaaaacagtataagccacgcgcaatcgtgaacttt
gctgctgagagtcatgtggaccgatctattcatgggcctgcggatttcgttgagacaaat
attgttggcacatttaatttattagagtgtgcgcgtgaattttggaatgctctcgaagga
aaggccaaggaagagtttcgctttcatcatgtatcaactgatgaagtgtatgggtcttta
tcagcaactgatcccgccttcacggaaaccaatccttatgagccaaatagtccttactct
gcctctaaagcagcgtcagatcatttggttcgtgcttggtttcatacctatggtttgccg
gtagtaactacaaactgctctaataactatggcccttatcacttcccagaaaaactaatt
ccattagtgattttgaatgccctaaatagcaagccattgccaatttatggtgatggtcaa
cagattcgggattggctctatgtgggcgaccactgcttggcaattcgtgaagtattggct
aaaggcaaattgggtgagacctacaacattggcggttggaatgaaaaggccaatattgat
gttgtgaaaaccatttgtagtattttggatgagcttaagcctcgtgctgacggtagaagc
tatgtagagcaaatcacttacgtgaaagaccgccctggacatgatcgtcgttacgcgatt
gatgccagcaaggttgagcgtgatttaggctggagaccagcggaaacttttgatactggc
attcgtaaaacagtgcagtggtatttggataaccacgtctggattgacggggtggttagc
ggttcttatcgcgactgggttgagaagcaatatagataa
DBGET
integrated database retrieval system