Polynucleobacter ibericus: AOC20_02580
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Entry
AOC20_02580 CDS
T09789
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu00300
Lysine biosynthesis
piu01100
Metabolic pathways
piu01120
Microbial metabolism in diverse environments
piu01230
Biosynthesis of amino acids
Module
piu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AOC20_02580 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
piu01002
]
AOC20_02580 (dapE)
Enzymes [BR:
piu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AOC20_02580 (dapE)
Peptidases and inhibitors [BR:
piu01002
]
Metallo peptidases
Family M20
AOC20_02580 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QWE09117
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Position
complement(479544..480695)
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AA seq
383 aa
AA seq
DB search
MSATLELTEALIACHSVTPADGGCQDLITKRLQAIGFHTESVVSGPENFQVTNLWAIKKG
LGGDQGKVLVFAGHTDVVPTGPLEKWTSNPFAPTIRDGMLYGRGAADMKTSLAGFVVATE
EFVTAHPDHQGSIAFLITSDEEGPANDGTVIMCERLQKQGQRLDYCIIGEPTSVDQLGDM
IKNGRRGSLSGKLKVKGIQAHIAYPHLGKNPIHLSAPAITALVETEWDKGNEYFQPTSFQ
ISNVHAGTGANNVIPGELVVDFNFRFSTESKPEQLRERLEKILKDAGLEFEIDWVLGGSP
FITGDGALAGALRTAIKAETNIDTELSTTGGTSDGRFIAKICKEVVEFGPLNATSHKIDE
CVIVDDVVPLKNIYRKTLEQLIA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccacacttgagctcactgaagctctcattgcctgccattccgtaacgccagct
gatggtggctgccaagatttaattacaaagcgtctgcaagcaattggttttcatactgag
agtgttgtgagtggtcctgaaaattttcaggtaaccaacttgtgggcaatcaaaaaaggt
ctgggtggcgatcaaggcaaagtcttggtattcgctggtcacactgacgtagtaccaaca
ggtccattagaaaagtggacgagcaatccttttgctccaacaattcgtgacggcatgctc
tatgggcgtggtgcagcggatatgaaaacctctctcgctggctttgtagtagctacagaa
gaatttgtcaccgcgcacccagatcatcaaggctccattgccttcttgattactagtgac
gaagaaggtcctgccaatgatggcaccgtcatcatgtgtgagcgtttacaaaagcaaggt
caacgtttggactattgcatcatcggtgaaccgacttcggttgatcaacttggtgacatg
attaagaatggtcgtcgcggatccttatccggcaaactcaaagtaaaaggtattcaggca
catatcgcctaccctcaccttggcaagaatcctattcatctatctgcgccagcaattacc
gcattagttgaaactgagtgggataaaggtaatgaatacttccaacctacaagttttcag
atttcgaatgtacatgcaggcactggcgcaaataatgtcatccctggtgagttggtcgtg
gactttaatttccgcttctctaccgaaagcaaaccagagcaattgcgtgagcgcttagaa
aagattctgaaagatgctggtctagaatttgagatcgattgggtattgggtggtagccca
ttcatcaccggtgatggtgctctagcaggtgcactacgcacagctatcaaagcagaaacc
aatattgatacagaactctccactactggtggcactagtgatggacgttttatcgccaag
atctgcaaagaagttgtagagtttggccccctcaatgcaacaagccacaaaattgatgag
tgcgtcattgttgatgatgtggtgccactcaaaaatatctatcgcaagacgctcgagcag
ttaattgcctaa
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