Polynucleobacter ibericus: AOC20_03235
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Entry
AOC20_03235 CDS
T09789
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
piu
Polynucleobacter ibericus
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piu03400
]
AOC20_03235
Enzymes [BR:
piu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOC20_03235
DNA repair and recombination proteins [BR:
piu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AOC20_03235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_12
AAA_30
ResIII
AAA_25
DEAD
Motif
Other DBs
NCBI-ProteinID:
QWE09592
LinkDB
All DBs
Position
604613..608134
Genome browser
AA seq
1173 aa
AA seq
DB search
MNVLPEKRVYSESLACDPQRSVIVSACAGSGKTWLLVARMVRLLLDDVKPQEILALTFTR
KAAQEMRDRLYGLLEQFSKSDDASLIKELTARGMARDQAEKYLPKAKALYEQVLANPQPI
VIDTFHGWFGRLLGAAPVSLGIQPGFKLREDAKRLQEECLDDWWGDLTPELKAHYDVLLK
YLGSHETQKLLMGKSSLLKQRGAWAFFAKKCNQTSVSPIERLKQSLHKLNLPNPLLGQWN
APNVLEDLQFLARCFQNSSVKDSDLLQYLLPAIACKEREGNVMEVASHFQTTFLTKDPKY
RSNNDKALGEAKKYLEKMGESHRIDEHIAIKQQWGHAFEEYLLWQAEQDVFLINEAWFAL
SQSMMAHASAQKENMRVRDFDDLEVGVSLLMGEPEHAAYLQSRLDAKYKQILIDEFQDTN
PLQWQILRAWLAGYSEGDERPKVFIVGDPKQSIYRFRRADPRLFVSAARFLYQYHDAAYI
EQDKTRRNAPEINQTVNRIFQGEQVPPDYPYSEQQTLWTTSDEGKPTDVYAQQGEIYLLP
LIPYAEQTQEPREGSAFDGAIADSSETVGVIQRQHEGELVARLIKEIIATRKVADKEGGK
EIWREARASDFLLLVKRRKYLPQYERALRDVKLAYESPRLGGLLNTLEIDDLIALLTVLV
TPRHDLPLAQVLRSPIFSFTEKQMQQLAVAMTSGQYRSWWDALQDSKDAKLQRAGRYLQH
WHVLGERLPVHDLLDRIYQEGDVRLKYAAVCQDLDRPQVLANLDAFLEVALNQDGGQYPS
LSRFIQEMNTKRRGDDDETPDEGDVDAASDDNLAEVDEESEMSEEDRYKRVRLMTIHGAK
GLESPFVIILDANNTDTNVDYSGVLIDWSPQEEGPSHLSLFTSKTLTSPRTEINEAEKQI
GEKENWNLLYVAMTRARQGLWISGDAQKPTTNNPSGLDKTSWYGKASKAELPVYQVGDQA
GSIEETETIQSKQENAVEDFFLDWNPAQESHTQMLSDIESGVTVEVFAGEDEQASNPDPE
ILEEGTNFHKLLEFLTPDTTNQAKPAMPSEQELMDWLAVDQSHAETLLSRTKKVLETPEL
KRYLTSGEWLQAWNELDITSEDGKSYRMDRLIEFDDHLAIIDYKLTIPEVASEQYEKYRK
QLQGYQAELTRIRKDKPNKAYLISSKGEMVEFR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcttccagagaagcgggtctattcagaaagccttgcttgtgatccccagcgc
tcggtaattgtctctgcttgtgcaggcagcggcaagacttggttgctagttgcgcgtatg
gtacgcctattgcttgacgatgtgaagccgcaagagattcttgcattaacgttcacacgc
aaagccgcgcaagaaatgcgtgaccgcttatatggattgctcgagcaattttctaaaagt
gacgatgcttcgttaattaaagaactcaccgctagaggcatggcgcgtgatcaagctgaa
aaatacctgcccaaggctaaagcgctttatgagcaggtgctggcaaatccacagccgatt
gtgattgacacctttcatggttggtttggcagattattgggtgcagcccccgtatcactg
ggtattcagccgggatttaagctgcgtgaagacgccaagcgattgcaagaggagtgtctt
gacgattggtggggtgatctcacgccagaactgaaagcccattacgacgtcttactcaaa
tacttaggatcacatgagacgcaaaaactcttgatgggtaaaagtagtctcttaaagcaa
agaggagcatgggctttctttgcaaagaaatgcaatcaaactagcgtgagcccaattgag
cgcctaaaacagtctctacataaactgaacttacctaatccattactaggtcagtggaat
gcacccaacgtactagaggatcttcagttcctagcgcgctgttttcaaaatagcagcgta
aaagatagtgatctcctgcaatacttgttgcctgccattgcctgtaaagaacgtgaaggc
aatgtgatggaggtcgcgagtcactttcaaactactttcttaaccaaagatccaaaatat
cgcagtaataacgataaagctttgggtgaggcgaaaaaatatctcgagaagatgggtgag
tctcatcgtatcgatgagcacatcgctattaagcagcaatgggggcatgcttttgaggaa
tatctcctatggcaagctgagcaggatgtctttcttatcaatgaagcttggtttgctctg
agtcaatccatgatggcacacgccagcgcccaaaaagagaatatgcgtgtgcgtgatttc
gatgatctggaagttggcgttagcttattaatgggggagcctgaacatgctgcatatctt
cagtctcgtttagatgccaagtacaaacaaattttgatagatgagttccaggataccaat
ccattgcagtggcaaattctgcgagcctggttagcgggctacagcgaaggagatgagcgg
ccaaaagtatttattgtgggcgatcccaagcagtcgatttatcgcttccgccgtgccgac
cccagattgtttgtaagtgcagcacggtttttgtatcaataccatgatgcggcttatatt
gagcaagacaaaacgcgtcgcaacgctcctgaaattaatcaaacagtgaatagaatcttt
cagggcgagcaagtgccgcctgattacccgtattcagagcagcaaaccctgtggaccact
tcagatgaaggtaagccgaccgatgtttatgctcagcaaggcgagatttatttattaccc
ctcattccttatgcagagcagacacaggaaccccgagagggcagcgcttttgacggagcg
attgccgattcaagtgaaacggttggtgtgattcagcgtcagcatgagggtgagttagtc
gcgcgtctaattaaagagatcatcgcgacacgcaaggtagctgacaaagaaggcggcaag
gaaatatggcgtgaggctagagcaagcgatttcttgttgctagtcaaacgtcgtaaatac
ttacctcaatacgaaagggcactgcgtgatgtaaagcttgcctatgagagtccacgttta
ggcgggttgcttaatactttagagatcgatgatcttattgctttactgactgttttggta
acacctcgtcacgacttaccgctagcccaagttcttagaagtccgatttttagttttaca
gaaaaacaaatgcagcaattggcagtagcaatgacatcaggtcaatatcgctcttggtgg
gatgcactgcaagatagcaaggatgcaaagctacaaagagctggtcgttatctccagcat
tggcatgtcttaggggagcgcttgccagtccatgacctgctcgatcgtatctaccaagag
ggagatgtacgcctcaaatatgctgccgtctgtcaggatcttgatcgtccgcaggtattg
gcaaatttagatgcttttttagaggtggcactcaatcaagacggtggtcaatacccaagc
ttaagccgttttattcaagaaatgaatacgaaacgccgtggcgatgatgatgaaacgccc
gacgagggagatgttgatgctgccagcgatgacaacttggcggaagtagatgaagagagc
gagatgtcagaggaggatcgctataagcgtgtgcgactcatgacaattcacggcgccaaa
ggtttggagtcgccttttgtcattattctcgatgcgaacaataccgatacgaatgtggac
tacagtggcgtgttaattgattggtcaccacaagaagagggtccatctcacctatctctc
tttacttctaaaacattaacgagtcctcgcactgaaatcaatgaagctgagaagcaaatc
ggtgaaaaagaaaattggaacttactttacgtcgctatgacccgtgcgcgccagggctta
tggattagcggtgatgctcaaaagcccaccaccaataaccctagtggcctagataaaact
tcttggtatggcaaggcaagcaaagctgagttacctgtatatcaggtaggtgatcaagcg
ggatcaatagaagagactgaaactattcaatctaagcaagaaaatgcagtcgaagatttt
ttcttggactggaatcctgcacaagagagccacacgcaaatgctctctgacatcgaaagt
ggtgtcacagttgaagtgtttgcgggcgaagatgagcaagctagcaatcccgatcctgaa
attttggaagagggtacgaacttccataagttgcttgaatttctcactccagataccact
aaccaagcaaagccggcaatgccaagcgagcaagagctcatggattggctagccgttgat
cagagtcatgcggaaacattactctcccgtactaaaaaagtactagagactccagagctt
aagcgctatctcacatcaggtgagtggttgcaagcttggaatgagctcgatatcaccagc
gaagacggtaagagctatcgcatggaccgtttgatagagtttgatgaccatctagccatc
attgattacaagctgactatcccggaagtggctagtgagcagtatgaaaagtaccgcaag
caattgcagggctaccaagctgaactcacgcgcatcagaaaagacaagccaaacaaggct
tacttgatttcatccaagggcgagatggttgaatttaggtaa
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integrated database retrieval system
