Polynucleobacter ibericus: AOC20_03275
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Entry
AOC20_03275 CDS
T09789
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu03030
DNA replication
piu03430
Mismatch repair
piu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOC20_03275 (dnaX)
03430 Mismatch repair
AOC20_03275 (dnaX)
03440 Homologous recombination
AOC20_03275 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
piu03032
]
AOC20_03275 (dnaX)
03400 DNA repair and recombination proteins [BR:
piu03400
]
AOC20_03275 (dnaX)
Enzymes [BR:
piu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOC20_03275 (dnaX)
DNA replication proteins [BR:
piu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOC20_03275 (dnaX)
DNA repair and recombination proteins [BR:
piu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOC20_03275 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_14
AAA_5
AAA_22
AAA_30
AAA_18
AAA_24
AAA_19
AAA_2
nSTAND3
TsaE
AAA_assoc_2
Mg_chelatase
Glyco_tranf_2_5
SKI
NTPase_1
APS_kinase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QWE09246
LinkDB
All DBs
Position
612947..614620
Genome browser
AA seq
557 aa
AA seq
DB search
MTALALARSWRPKTFSELVGQDHVVKALTHALDQGRLHHAWLFTGTRGVGKTTIARIMAK
ALNCTGSDGSGKMTSEPCGKCPACMEIDAGRFVDYIEMDAASNRGVDDIASLLEKAAYAP
SNGRYKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTILSRCLQFNL
KQMPVPLIVEHLEKVLAAEKVECEVNALRVLAKAAQGSMRDALSLTDQAIAYAAGKVTEE
SVRGMLGTLDDAYLIRILDCLIAKDGASLLAVANEMGERSMSFSLALQDLSSLLQKIAAA
QVVPESVLEDWPEAGEIRRLAGQLTKEEAQLFYQITITSRPDLSLAPDEQTGFAMTLLRM
LAFRPGNGGGGSSSSTPSSPSAPPVNTARPAPAASASRAAAPAPVAKAAAPAQAPSPAAS
APVAAAGNSAERPDWHALMRQLPVKGLVQQLAFQTELQDWNDSAAGVRATIVTPMPQLAS
DASVGRLADALTVHFGKPVKIVIEKGEVEGKTVAKVDAQIHQEKRMNAEQMIAADPFIQQ
LEKEFGAKVVGGSVKPL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacagcattggcattagcccgttcgtggcgccccaaaaccttctctgaattagttggc
caagaccatgtggttaaggctttaacgcatgccttggatcagggtcgcctgcaccatgca
tggctctttactggcactcgcggggtaggtaagacgactattgcccgaattatggctaaa
gccctcaattgcacaggatccgatggttccggcaagatgacttcagagccttgcggaaaa
tgcccagcttgtatggaaatcgatgcaggccgctttgttgactatatagagatggatgct
gcaagtaatcgtggtgttgacgacattgcttccctgctagagaaagctgcgtacgcacca
agtaatggtcgttataaggtttacatgattgacgaggtgcacatgctcaccaatcatgcc
tttaatgccatgctcaaaactttggaagagcctccagagcacgtcaaatttattctggcg
acaacagatccgcaaaagatccctgtcactattctgtctcgttgcttgcagttcaatctc
aagcaaatgccagtaccgctcatcgttgagcatctcgaaaaagtgctggcagctgaaaaa
gtcgaatgtgaagtcaatgctttgcgtgttctggctaaggccgctcaaggttctatgcgc
gatgcgctctcattaactgaccaagcgattgcttacgctgctggcaaggtaactgaagaa
tcggtgcgcggcatgctcggtaccctagatgatgcttatctcattcgtattctggattgt
ttgattgctaaagatggtgcaagccttctggcagtcgcaaacgaaatgggagagcgcagc
atgtctttctcattagcgttacaagatctatcaagcttgttgcaaaaaattgcagcagcg
caagttgttccagaatctgttttagaagattggccagaagcaggtgagattcgtcgttta
gccggtcaactgacgaaagaagaagcgcaactcttttatcaaattactattactagccgc
ccagatttatctttggcaccagatgaacaaactggttttgctatgacgctcttgcggatg
ctcgcatttcgtccgggcaatggcggtgggggtagttcttcttcaacaccctcatcacca
tcggctccaccggtaaatactgctcgcccagcacctgctgcatcagcatccagagcagct
gctcctgcgccagtagcaaaagctgctgctccagctcaagcgccgtcacctgccgcttca
gcacctgttgctgccgcaggtaactcggcagagcgtcctgattggcatgccttgatgcgt
cagttgccggtaaagggattagtacagcagttagcgtttcagaccgaattacaagattgg
aatgattctgctgcaggtgtacgcgcaaccatcgtgacgccaatgccgcagttagcttct
gatgcatctgttggtcgtttggctgatgccctcacagttcactttggcaaacctgtgaag
attgtgattgagaagggtgaagtagaaggcaaaactgttgccaaggttgatgcccagatt
catcaagagaaaagaatgaatgcagaacaaatgattgcagctgatccttttattcagcaa
ttggaaaaagagtttggcgccaaagtagttggcggctcagtaaaacctctttga
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