Polynucleobacter ibericus: AOC20_04435
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Entry
AOC20_04435 CDS
T09789
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu00730
Thiamine metabolism
piu01100
Metabolic pathways
piu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AOC20_04435 (thiC)
Enzymes [BR:
piu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AOC20_04435 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QWE09613
LinkDB
All DBs
Position
complement(841950..843848)
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AA seq
632 aa
AA seq
DB search
MPSLKSLERDFGQKFAYPASTKTYLQGSRPDVKAPIRMIEQLPTRVGEEMLANPPVPVYD
TSGPYSDPDVVINLEKGLPRLRDAWIAERNDTIQLSGPSSEYGVARSQDAATQNLRFSHI
SAPRVAKPGQNVSQMHYARQGIITPEMEYIALRESMGLEQLRKDPAYKQLLKQHPGKGYG
ANLPDIVTGEFVRSEIAAGRAIIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSINE
EVEKMVWSIRWGADTIMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALDKTGGIAEDLT
WEMFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTADRITGIVSRGGSIMAKWCLAHHKENF
LYTKFDEICEIMKAYDVSFSLGDGLRPGCIADSNDAAQFGELHTLGELTAKAWKHDVQVM
IEGPGHVPMQRIEENMTEELKHCLEAPFYTLGPLITDIAPGYDHITSGIGAAQIGWYGTA
MLCYVTPKEHLGLPDKEDVREGIITYKIAAHGADLAKGLPGAQVRDNALSKARFEFRWED
QFNLGLDPERAREYHDATLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYAATLDADGNPK
AKVIPITEVADASKGMEEMSAEFRKRGSEIYQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
attccaagtttaaaaagtttagagcgcgactttgggcaaaagtttgcctatccagcttca
actaaaacttacctccaaggttcaaggccggatgtcaaagcgccgatccgcatgattgag
caactacctactcgcgttggtgaagaaatgctcgccaatccgcctgtacccgtctatgac
acctcgggcccatacagcgatccagatgttgtgatcaatttagaaaaaggcttaccaaga
ttgcgtgatgcctggattgcggagcgcaatgacacgattcaattatcaggccctagttct
gagtatggtgttgcacgctcacaagatgcagcgacacaaaatttacgcttttcacatatc
agcgcgccgcgtgtagcaaagcctggccaaaacgtcagtcagatgcactacgctcgccaa
ggaattattacgccagaaatggaatatatcgctctacgtgaatccatgggccttgagcag
cttcgcaaagaccctgcctacaagcagctattgaagcagcatcctggcaaaggctatggc
gctaatctgcctgacatcgttactggtgagtttgtacgctcagaaattgctgctggtcgc
gccattattcctgcgaacattaaccatccagaattagagccaatgattattggtcgtaac
ttccgcgtgaagattaatggcaacttgggtaactctgctgttacttcatccattaatgaa
gaagttgaaaaaatggtgtggtccattcgttggggtgcagataccatcatggatctttct
actggtaaacatattcatgagacacgtgagtggattattcgtaactcacctgtaccgatt
ggtaccgttccaatctatcaagcattggataaaaccggtggcattgcagaagatctcacc
tgggaaatgttccgcgataccttaattgaacaagctgagcaaggcgtggattacttcacc
atccatgcgggtgtattgctgcgttatgtaccactgaccgctgatcgcattaccggcatt
gtttctcgcggtggttcgatcatggcgaaatggtgcctggctcaccataaagaaaacttc
ctctatacgaagtttgacgaaatttgtgaaatcatgaaagcctatgacgtgtcatttagc
ttaggtgatggcttgcgtcctggttgtattgctgactctaatgatgctgcccagtttggc
gaacttcataccctcggtgaattgactgctaaggcatggaaacatgatgtccaggtcatg
atcgaaggtcctggtcatgtaccaatgcagcgtattgaagaaaatatgacggaagagctc
aagcattgcttggaagctccgttctacacccttggaccattgattaccgatatcgctcct
ggctacgaccacatcaccagcggaattggtgctgcgcaaattggttggtacggcacagca
atgctctgctatgtcacaccaaaagagcatttaggtttgccagacaaagaagatgtccgc
gaaggcatcatcacttacaagattgcagcgcatggcgctgacctggctaaaggcttacct
ggcgcacaagtacgtgataacgccctgtcaaaagcacgttttgaattccgctgggaagac
cagttcaatttgggtctagaccctgagcgtgctcgtgaatatcacgatgcgactctgcca
gctgaaggcgcgaagattgctcacttctgttcgatgtgtggtccgaagttctgctcgatg
aagatcacgcaagaagtacgtgattacgcggcaacattggatgcggacggtaatccgaag
gctaaagtaattccgattactgaagtagcagatgcctccaaaggcatggaagaaatgtct
gcggagttccgtaaacgcggtagcgagatttatcagtaa
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