Polynucleobacter ibericus: AOC20_04590
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Entry
AOC20_04590 CDS
T09789
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
piu
Polynucleobacter ibericus
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
piu03009
]
AOC20_04590 (rimO)
Enzymes [BR:
piu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AOC20_04590 (rimO)
Ribosome biogenesis [BR:
piu03009
]
Prokaryotic type
ribosomal protein modification factors
AOC20_04590 (rimO)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QWE09479
LinkDB
All DBs
Position
876016..877374
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AA seq
452 aa
AA seq
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MAGKIGFVSLGCPKALVDSELILTQLSAEGYETAKDYSGADLVVVNTCGFIDSAVEESLS
AIGEALAENGKVIVTGCLGARKNTDGSDLISSIHPKVLAVTGPHATDEVMQAIHLHLPKP
HDPFTDLVPPAGVKLTPKHYAYLKISEGCNHRCTFCIIPNMRGDLVSRPIGEVLLEAKRL
FESGVKELLVVSQDTSAYGVDIQYRTGFWDGKPVKTKMFDLVNALNQIAREHQAWVRLHY
VYPYPHVDDVLPLMAEFSEHGYGVLPYLDIPLQHAHPDVLKRMKRPASGEKNIERILAWR
DACPDLVIRSTFIAGFPGETEQEFEYLLNFLDEAQIDRAGCFAYSPVDGATANQLENPVP
EEIREERRARFMAKAEEISIKRLAKKVGKRIQVIIDRVDDQGGIGRSIGDAPEIDGLVRV
LPPSKPSKRYRAGEIIRATVIGSQGHDLIAET
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggctggaaaaattggatttgtatccttaggctgccctaaggcgctagtagattctgaa
ctgatcctgacgcaacttagcgctgaaggatacgagacagccaaagactattctggcgcg
gatctcgttgttgttaacacctgcggttttattgattcagcagttgaggagagcctctcc
gctattggtgaggccttagccgaaaacggcaaagttattgtgactggttgtttgggtgct
agaaagaataccgatggcagcgatctgatttccagtattcaccctaaagtccttgctgtt
acagggccccatgctactgatgaggtcatgcaagcgattcatttgcatttacccaagccg
catgatccatttacagatttagtaccaccagccggtgtaaaacttacaccaaagcattac
gcttatctcaaaattagcgagggttgtaatcatcgctgtactttttgcatcatcccgaat
atgcggggggatttagtttcacgtcccataggtgaagtcttgcttgaagctaagcgccta
tttgagtccggcgtaaaagagttattggttgtatcgcaagatacaagtgcctatggtgtg
gatattcaatatcgcaccggcttttgggatggcaaaccagttaaaactaagatgttcgat
ttggtgaatgccttaaatcaaattgcgcgcgagcatcaagcttgggtgagattgcattat
gtatacccctatccgcatgtggatgatgtgctgcctttaatggctgaattctcagagcat
ggttatggcgttcttccatacttggatattccgctgcaacatgcccacccggatgttctc
aagcgcatgaagcgtcctgctagcggtgaaaagaatatagagcgcatcttggcatggcgt
gatgcttgtcccgatctcgtgattcgcagcacctttattgcaggctttcctggtgaaacc
gagcaagagtttgaatatcttctgaatttcttagatgaagctcaaattgatagagcaggc
tgttttgcctactctcccgtcgatggcgctacagccaatcaattagaaaaccctgttcct
gaagagattcgtgaagagcgtcgagccagattcatggctaaagcagaagaaatctctata
aagcgacttgccaaaaaagtaggcaagcgcattcaggtgattattgatcgagtagatgac
cagggtggaattgggcgcagcattggtgatgcccccgaaattgatggtttagtgagggtt
ttgccgcctagcaagccttccaaacgctatcgcgccggagaaatcatccgagcaacggtt
attggctcccaagggcatgacctaatagccgaaacttga
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