Polynucleobacter ibericus: AOC20_05015
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Entry
AOC20_05015 CDS
T09789
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu03030
DNA replication
piu03430
Mismatch repair
piu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOC20_05015 (dnaQ)
03430 Mismatch repair
AOC20_05015 (dnaQ)
03440 Homologous recombination
AOC20_05015 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
piu03032
]
AOC20_05015 (dnaQ)
03400 DNA repair and recombination proteins [BR:
piu03400
]
AOC20_05015 (dnaQ)
Enzymes [BR:
piu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOC20_05015 (dnaQ)
DNA replication proteins [BR:
piu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOC20_05015 (dnaQ)
DNA repair and recombination proteins [BR:
piu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOC20_05015 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QWE07810
LinkDB
All DBs
Position
960729..961439
Genome browser
AA seq
236 aa
AA seq
DB search
MRQVILDTETTGLNPATGDRIIEIGCVEMVGRRLTDRTFHYYINPERDIDAGAFAVHGLS
REFLSDKPVFANIVEQLIEFVDGAEIVIHNAAFDLGFLDNEFALLKRPPFRNLAAKLTDT
LLDARQMFPGKRNSLDALCERFSISNKHRTLHGALLDAQLLAEVYVAMTRGQEDLSIDLI
DYTVGADSAGHTKALPTQLKVLAATDDDIQSHEKILAEIAKASKKDPIWSPLSAAS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaagttattctcgatactgaaacaactggtttaaacccggctaccggcgatcgc
attattgaaattggttgcgtagaaatggttggtcgtcgcttaactgacaggacctttcat
tactacatcaatcctgaacgcgatattgatgcaggtgcctttgcagtacatggtctttca
agagagttcttgtctgacaaacccgtctttgcaaacattgttgagcagttaattgaattt
gtggatggcgctgaaatcgttattcataacgcagccttcgacttgggcttcttagacaat
gagtttgctttactcaagcgtccgccatttcgcaatctggcagcaaaactaacagacacg
ctacttgatgcacgtcaaatgtttcccggcaagagaaactccttggatgcattatgtgag
cgcttctcgattagcaataaacatcgtacattgcacggcgctttactcgatgcccagtta
ttggctgaagtttatgtagccatgaccagaggtcaagaggatctctcgatcgatttgatt
gattacacagttggcgctgattcagctggccacaccaaagctttaccaactcagcttaag
gtattggcggcgacggatgatgacatccaaagccatgaaaaaatcttagctgaaatcgca
aaggcaagtaaaaaggaccccatctggagtcctttaagtgctgctagctaa
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