Polynucleobacter ibericus: AOC20_07160
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Entry
AOC20_07160 CDS
T09789
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
piu
Polynucleobacter ibericus
Pathway
piu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AOC20_07160 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
piu03019
]
AOC20_07160 (orn)
03009 Ribosome biogenesis [BR:
piu03009
]
AOC20_07160 (orn)
Messenger RNA biogenesis [BR:
piu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AOC20_07160 (orn)
Ribosome biogenesis [BR:
piu03009
]
Eukaryotic type
Pre-60S particles
RNases
AOC20_07160 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
CTD1
Motif
Other DBs
NCBI-ProteinID:
QWE08198
LinkDB
All DBs
Position
complement(1408496..1409092)
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AA seq
198 aa
AA seq
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MSEQTNITATPVSKMAPANEHLIWVDMEMSGLNPETERILEIAIIVTDAHLNTIATAPVW
VVHQEDAVLDAMDAWNKGTHGRSGLIDKVKASTVDEATVEAECIAFLKKYIKAGIAPMCG
NTIGQDRRFMAKYMPKLEAYFHYRNIDVSTLKELCKRWHPELVKGFTKNQAHTALADIEE
SIEELKYYREKFIVPLPQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaaactaacattacagcaaccccagtaagcaagatggcgccagccaatgaa
cacctcatttgggtggatatggaaatgtcgggtttaaacccagaaaccgagcggattctg
gaaattgccattattgtgaccgacgctcaccttaataccatcgctacagcaccggtttgg
gtagtgcatcaagaagatgcagttttggacgcgatggatgcctggaataagggaactcat
ggccgctctggtttgattgataaagtaaaggcatccactgtggatgaggctactgttgaa
gcagaatgtattgcctttttgaaaaaatatattaaggcgggtattgcgccaatgtgtggc
aatacgattggtcaagaccgacgcttcatggcaaagtacatgccaaagttagaggcgtac
tttcattatcgaaatattgatgtatctacattaaaagagctgtgtaagcgctggcatcct
gagttggtgaaaggcttcactaagaatcaagctcatacggccttggctgacattgaagaa
tccattgaagagttaaagtattaccgtgagaaatttattgtgccgcttcctcagtag
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