Polynucleobacter ibericus: AOC20_07275
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Entry
AOC20_07275 CDS
T09789
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
piu
Polynucleobacter ibericus
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
piu03032
]
AOC20_07275
03036 Chromosome and associated proteins [BR:
piu03036
]
AOC20_07275
03400 DNA repair and recombination proteins [BR:
piu03400
]
AOC20_07275
DNA replication proteins [BR:
piu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AOC20_07275
Chromosome and associated proteins [BR:
piu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AOC20_07275
DNA repair and recombination proteins [BR:
piu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AOC20_07275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
ThiS
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QWE08219
LinkDB
All DBs
Position
complement(1430271..1430615)
Genome browser
AA seq
114 aa
AA seq
DB search
MTDQEQQAITRSELVESLAEQFPQLLPRDVELAVKTLLDTMTHALAEGKRIELRGVGSFV
LHHRPARTGRNPKSGEKVLIPEKRVPHFKPGKELRERVDYKPLKQAGPKEGSGA
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcaagagcaacaagctattacccgctccgaactagtggagagcctcgcggaa
caatttccgcagcttttgcctagggatgtggagttggcggtaaaaacattgctggacaca
atgactcatgctttggctgagggcaagcgtatcgagttgcgcggcgtagggagctttgtg
cttcatcatcgtcctgcgcgcactggacgtaatccaaagtctggtgagaaagtgttgatt
ccagaaaaacgcgttccacacttcaagcctggcaaagagttgcgcgagcgagtagattac
aagccgttgaagcaggcgggccccaaagagggttctggtgcctaa
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integrated database retrieval system
